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@OpenSemanticLab

OpenSemanticLab

Web-based semantic data platform and workflow environment

DOI

Open Semantic Lab

Open Semantic Lab (OSL) is a holistic web platform that can capture all data and ideas and link them precisely (semantically/ontology-based) - no matter if it' s inventory (LIMS), lab notes (ELN), procedures (SOPs) or research (KB). Each piece of information can also be machine-read, blockchain-signed and written to automatically transfer (Lab 4.0) and analyze (AI) measurement data. OSL actively supports between the unstructured (liquid) and highly structured / ontologized phase of knowledge within organizations the formation of a partially structured (amorphous) phase, which acts as a (crystallization) seed for the consistent growth of the highly structured phase. As an open system, Open Semantic Lab can be easily adapted with little to none programming knowledge without losing the uniform structure. In this way, we can contribute to everyone's knowledge individually and yet in a standardized way.

General Introduction

Short Introduction @ EMIRI Workshop "RE-INVENTING MATERIALS RESEARCH" as PDF or Video

Related common compontents: OpenSemanticWorld and content packages: OpenSemanticWorld-Packages, hosted on opensemantic.world

Which problems are addressed?

Loss of knowledge

Most of the knowledge generated in industry and science is irrevocably lost because we lack suitable tools for sustainable and complete documentation.

AI accessible data structure

In addition, generated data can only be structured and made accessible to AI with a great deal of additional effort.

What are the core components?

  • An object oriented linked data schema, see OO-LD
  • MediaWiki, extented with Semantic MediaWiki and various other existing extensions
  • The Mediawiki extension 'OpenSemanticLab'
  • Ontologies, especially the General Process Ontology
  • A Graph-Database, currently blazegraph
  • A Time-Series-Database, currently TimeScaleDB
  • JupyterHub as Workflow-Environment
  • Node-RED as Dashboard-Solution
  • A Python Toolset
  • Connectors to platforms like IDS, PMD, NFDI/FAIRmat/NOMAD/OASIS etc. (tbd)
  • Interfaces to other ELN / LIMS tools like openBIS (in work)

Current state

Screenshots

OpenSemanticLab custom landing page displaying the available apps (described by installed schemas)

grafik

OpenSemanticLab workflow to build user specific apps

grafik

Example of a knowledge graph of various experiments created with OpenSemanticLab

grafik

Demos

KIproBatt Battery Production Knowledge Graph

grafik

video link

Related projects and initiatives

OpenSemanticLab was adapted/showcased in the following projects and initiatives. Funding information see individual pages / repositories.

Name Scope Activity Link
KIproBatt National (BMBF) Adapted https://kiprobatt.de
Mat-o-Lab National (BMBF) Adapted https://mat-o-lab.open-semantic-lab.org/
MaterialDigital National (BMBF) Showcased https://material-digital.de/ / Ontology Playground
NFDI MatWerk National (DFG) Showcased https://nfdi-matwerk.de/nfdi/2023/
BIG-MAP EU (HE) Adapted https://big-map.eu/ / Onterface
Battery2030+ EU (HE) Adapted https://battery.knowledge-graph.eu
CircEl-Paper EU (HE) Adapted https://circelpaper.projects01.open-semantic-lab.org
ReUse EU (HE) Adapted https://reuse.projects01.open-semantic-lab.org/

Contact

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  1. mediawiki-extensions-OpenSemanticLab mediawiki-extensions-OpenSemanticLab Public

    JavaScript 3

  2. osw-python osw-python Public

    Python 6 2

  3. osl-mw-docker-compose osl-mw-docker-compose Public

    Docker Compose for Mediawiki + OpenSemanticLab

    PHP 1

  4. mediawiki-extensions-MwJson mediawiki-extensions-MwJson Public

    Extension and standalone js lib to support storing and editing of structured data and meta data based on MultiContentRevisions, json, json-schema and json-ld.

    JavaScript 1

Repositories

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