merge lock file

.github/workflows/testing.yml

@@ -0,0 +1,32 @@
+name: pytest
+
+# Triggers the workflow on push for all branches
+on: [push]
+
+jobs:
+  pytest:
+    runs-on: ubuntu-latest
+    steps:
+      # Check out repo and set up Python
+      - name: Check out the repository
+        uses: actions/checkout@v4
+        with:
+          lfs: true
+
+      # Use cached python and dependencies, install poetry
+      - name: "Setup Python, Poetry and Dependencies"
+        uses: packetcoders/action-setup-cache-python-poetry@main
+        with:
+          python-version: 3.8
+          poetry-version: 1.2.2
+
+      # Run pytest with coverage report and upload results to coveralls
+      - name: Run tests on python 3.8
+        run: |
+          poetry run pytest --cov --cov-report xml:cobertura.xml --full-trace --show-capture=no -sv -n auto tests/
+      
+      - name: Coveralls
+        uses: coverallsapp/github-action@v2
+        with:
+          github-token: ${{ secrets.GITHUB_TOKEN }}
+          file: ./cobertura.xml

.github/workflows/update_requirements.yml

@@ -0,0 +1,36 @@
+name: update docs/requirements.txt for readthedocs
+
+on:
+  # Triggers the workflow on push but only for the main branch 
+  # and only for changes to the poetry.lock file
+  push:
+    branches: [ main ]
+    paths: [poetry.lock]
+
+jobs:
+  pytest:
+    runs-on: ubuntu-latest
+    steps:
+      # Check out repo and set up Python
+      - name: Check out the repository
+        uses: actions/checkout@v4
+        with:
+          lfs: true
+
+      # Use cached python and dependencies, install poetry
+      - name: "Setup Python, Poetry and Dependencies"
+        uses: packetcoders/action-setup-cache-python-poetry@main
+        with:
+          python-version: 3.8
+          poetry-version: 1.2.2
+
+      #  Generates and commits a requirements.txt used by readthedocs
+      - name: Export requirements.txt
+        run: poetry export --without-hashes --format=requirements.txt -o docs/requirements.txt -E docs -E notebook
+
+      - name: Commit changes
+        uses: EndBug/add-and-commit@v9
+        with:
+          default_author: github_actions
+          message: 'Updating requirements for docs'
+          add: 'docs/requirements.txt'

tests/test_processor.py

@@ -667,6 +667,7 @@ def test_compute():
 metadata["user0"]["email"] = "email"
 # NXinstrument
 metadata["instrument"] = {}
+metadata["instrument"] = {}
 # analyzer
 metadata["instrument"]["analyzer"] = {}
 metadata["instrument"]["analyzer"]["energy_resolution"] = 110.0