Make verbose a private property, and add getter and setters for it, t…

…o propagate verbosity

sed/calibrator/delay.py

@@ -48,8 +48,8 @@ def __init__(
         else:
             self._config = {}
 
-        self.verbose = verbose
-        set_verbosity(logger, self.verbose)
+        self._verbose = verbose
+        set_verbosity(logger, self._verbose)
 
         self.adc_column: str = self._config["dataframe"].get("adc_column", None)
         self.delay_column: str = self._config["dataframe"]["delay_column"]
@@ -60,6 +60,25 @@ def __init__(
         self.calibration: dict[str, Any] = self._config["delay"].get("calibration", {})
         self.offsets: dict[str, Any] = self._config["delay"].get("offsets", {})
 
+    @property
+    def verbose(self) -> bool:
+        """Accessor to the verbosity flag.
+
+        Returns:
+            bool: Verbosity flag.
+        """
+        return self._verbose
+
+    @verbose.setter
+    def verbose(self, verbose: bool):
+        """Setter for the verbosity.
+
+        Args:
+            verbose (bool): Option to turn on verbose output. Sets loglevel to INFO.
+        """
+        self._verbose = verbose
+        set_verbosity(logger, self._verbose)
+
     def append_delay_axis(
         self,
         df: pd.DataFrame | dask.dataframe.DataFrame,

sed/calibrator/energy.py

@@ -91,8 +91,8 @@ def __init__(
 
         self._config = config
 
-        self.verbose = verbose
-        set_verbosity(logger, self.verbose)
+        self._verbose = verbose
+        set_verbosity(logger, self._verbose)
 
         self.loader = loader
         self.biases: np.ndarray = None
@@ -125,6 +125,25 @@ def __init__(
         self.offsets: dict[str, Any] = self._config["energy"].get("offsets", {})
         self.correction: dict[str, Any] = self._config["energy"].get("correction", {})
 
+    @property
+    def verbose(self) -> bool:
+        """Accessor to the verbosity flag.
+
+        Returns:
+            bool: Verbosity flag.
+        """
+        return self._verbose
+
+    @verbose.setter
+    def verbose(self, verbose: bool):
+        """Setter for the verbosity.
+
+        Args:
+            verbose (bool): Option to turn on verbose output. Sets loglevel to INFO.
+        """
+        self._verbose = verbose
+        set_verbosity(logger, self._verbose)
+
     @property
     def ntraces(self) -> int:
         """Property returning the number of traces.

sed/calibrator/momentum.py

@@ -79,8 +79,8 @@ def __init__(
 
         self._config = config
 
-        self.verbose = verbose
-        set_verbosity(logger, self.verbose)
+        self._verbose = verbose
+        set_verbosity(logger, self._verbose)
 
         self.image: np.ndarray = None
         self.img_ndim: int = None
@@ -132,6 +132,25 @@ def __init__(
 
         self._state: int = 0
 
+    @property
+    def verbose(self) -> bool:
+        """Accessor to the verbosity flag.
+
+        Returns:
+            bool: Verbosity flag.
+        """
+        return self._verbose
+
+    @verbose.setter
+    def verbose(self, verbose: bool):
+        """Setter for the verbosity.
+
+        Args:
+            verbose (bool): Option to turn on verbose output. Sets loglevel to INFO.
+        """
+        self._verbose = verbose
+        set_verbosity(logger, self._verbose)
+
     @property
     def features(self) -> dict:
         """Dictionary of detected features for the symmetrization process.
@@ -1241,7 +1260,7 @@ def apply_func(apply: bool):  # noqa: ARG001
                 transformations["creation_date"] = datetime.now().timestamp()
                 self.transformations = transformations
 
-            if self.verbose:
+            if self._verbose:
                 plt.figure()
                 subs = 20
                 plt.title("Final Deformation field")

sed/core/processor.py

@@ -117,10 +117,10 @@ def __init__(
         logger.debug(f"Use {num_cores} cores for processing.")
 
         if verbose is None:
-            self.verbose = self._config["core"].get("verbose", True)
+            self._verbose = self._config["core"].get("verbose", True)
         else:
-            self.verbose = verbose
-        set_verbosity(logger, self.verbose)
+            self._verbose = verbose
+        set_verbosity(logger, self._verbose)
 
         self._dataframe: pd.DataFrame | ddf.DataFrame = None
         self._timed_dataframe: pd.DataFrame | ddf.DataFrame = None
@@ -148,17 +148,17 @@ def __init__(
                 verbose=verbose,
             ),
             config=self._config,
-            verbose=self.verbose,
+            verbose=self._verbose,
         )
 
         self.mc = MomentumCorrector(
             config=self._config,
-            verbose=self.verbose,
+            verbose=self._verbose,
         )
 
         self.dc = DelayCalibrator(
             config=self._config,
-            verbose=self.verbose,
+            verbose=self._verbose,
         )
 
         self.use_copy_tool = self._config.get("core", {}).get(
@@ -227,6 +227,29 @@ def _repr_html_(self):
     #     """Provides an overview panel with plots of different data attributes."""
     #     self.view_event_histogram(dfpid=2, backend="matplotlib")
 
+    @property
+    def verbose(self) -> bool:
+        """Accessor to the verbosity flag.
+
+        Returns:
+            bool: Verbosity flag.
+        """
+        return self._verbose
+
+    @verbose.setter
+    def verbose(self, verbose: bool):
+        """Setter for the verbosity.
+
+        Args:
+            verbose (bool): Option to turn on verbose output. Sets loglevel to INFO.
+        """
+        self._verbose = verbose
+        set_verbosity(logger, self._verbose)
+        self.mc.verbose = verbose
+        self.ec.verbose = verbose
+        self.dc.verbose = verbose
+        self.loader.verbose = verbose
+
     @property
     def dataframe(self) -> pd.DataFrame | ddf.DataFrame:
         """Accessor to the underlying dataframe.
@@ -629,7 +652,7 @@ def generate_splinewarp(
 
         self.mc.spline_warp_estimate(use_center=use_center, **kwds)
 
-        if self.mc.slice is not None and self.verbose:
+        if self.mc.slice is not None and self._verbose:
             print("Original slice with reference features")
             self.mc.view(annotated=True, backend="bokeh", crosshair=True)
 
@@ -1334,7 +1357,7 @@ def calibrate_energy_axis(
             energy_scale=energy_scale,
             **kwds,
         )
-        if self.verbose:
+        if self._verbose:
             self.ec.view(
                 traces=self.ec.traces_normed,
                 xaxis=self.ec.calibration["axis"],

sed/loader/base/loader.py

@@ -42,7 +42,25 @@ def __init__(
         self.files: list[str] = []
         self.runs: list[str] = []
         self.metadata: dict[Any, Any] = {}
-        self.verbose = verbose
+        self._verbose = verbose
+
+    @property
+    def verbose(self) -> bool:
+        """Accessor to the verbosity flag.
+
+        Returns:
+            bool: Verbosity flag.
+        """
+        return self._verbose
+
+    @verbose.setter
+    def verbose(self, verbose: bool):
+        """Setter for the verbosity.
+
+        Args:
+            verbose (bool): Option to turn on verbose output. Sets loglevel to INFO.
+        """
+        self._verbose = verbose
 
     @abstractmethod
     def read_dataframe(

sed/loader/flash/loader.py

@@ -54,12 +54,31 @@ def __init__(self, config: dict, verbose: bool = True) -> None:
         """
         super().__init__(config=config, verbose=verbose)
 
-        set_verbosity(logger, self.verbose)
+        set_verbosity(logger, self._verbose)
 
         self.instrument: str = self._config["core"].get("instrument", "hextof")  # default is hextof
         self.raw_dir: str = None
         self.processed_dir: str = None
 
+    @property
+    def verbose(self) -> bool:
+        """Accessor to the verbosity flag.
+
+        Returns:
+            bool: Verbosity flag.
+        """
+        return self._verbose
+
+    @verbose.setter
+    def verbose(self, verbose: bool):
+        """Setter for the verbosity.
+
+        Args:
+            verbose (bool): Option to turn on verbose output. Sets loglevel to INFO.
+        """
+        self._verbose = verbose
+        set_verbosity(logger, self._verbose)
+
     def _initialize_dirs(self) -> None:
         """
         Initializes the directories on Maxwell based on configuration. If paths is provided in

sed/loader/mpes/loader.py

@@ -570,13 +570,32 @@ def __init__(
     ):
         super().__init__(config=config, verbose=verbose)
 
-        set_verbosity(logger, self.verbose)
+        set_verbosity(logger, self._verbose)
 
         self.read_timestamps = self._config.get("dataframe", {}).get(
             "read_timestamps",
             False,
         )
 
+    @property
+    def verbose(self) -> bool:
+        """Accessor to the verbosity flag.
+
+        Returns:
+            bool: Verbosity flag.
+        """
+        return self._verbose
+
+    @verbose.setter
+    def verbose(self, verbose: bool):
+        """Setter for the verbosity.
+
+        Args:
+            verbose (bool): Option to turn on verbose output. Sets loglevel to INFO.
+        """
+        self._verbose = verbose
+        set_verbosity(logger, self._verbose)
+
     def read_dataframe(
         self,
         files: str | Sequence[str] = None,

sed/loader/sxp/loader.py

@@ -56,7 +56,7 @@ class SXPLoader(BaseLoader):
     def __init__(self, config: dict, verbose: bool = True) -> None:
         super().__init__(config=config, verbose=verbose)
 
-        set_verbosity(logger, self.verbose)
+        set_verbosity(logger, self._verbose)
 
         self.multi_index = ["trainId", "pulseId", "electronId"]
         self.index_per_electron: MultiIndex = None
@@ -66,6 +66,25 @@ def __init__(self, config: dict, verbose: bool = True) -> None:
         self.raw_dir: str = None
         self.processed_dir: str = None
 
+    @property
+    def verbose(self) -> bool:
+        """Accessor to the verbosity flag.
+
+        Returns:
+            bool: Verbosity flag.
+        """
+        return self._verbose
+
+    @verbose.setter
+    def verbose(self, verbose: bool):
+        """Setter for the verbosity.
+
+        Args:
+            verbose (bool): Option to turn on verbose output. Sets loglevel to INFO.
+        """
+        self._verbose = verbose
+        set_verbosity(logger, self._verbose)
+
     def _initialize_dirs(self):
         """
         Initializes the paths based on the configuration.