Code

Merge/add transient noise mask#82

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Merged

simedroniraluca merged 55 commits intonext-devOceanStreamIO/echopype:next-devfrom merge/add_transient_noise_maskOceanStreamIO/echopype:merge/add_transient_noise_maskCopy head branch name to clipboardOct 2, 2023

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Commits

Commits on Aug 7, 2023

• added the feature described in issue 1

  

  mihaiboldeanu

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• Moved code for the signal attenuation mask to new file

  

  mihaiboldeanu

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• Resolved merge conflicts by accepting remote versions of files

  

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Commits on Aug 10, 2023

• Update mask_attenuated_signal.py

  

  mihaiboldeanu

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• renamed utils

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Commits on Aug 13, 2023

• Added unit test

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Commits on Aug 17, 2023

• Test can now automatically download its data

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• Update echopype/utils/mask_transformation.py

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• Update echopype/utils/mask_transformation.py

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• Update echopype/utils/mask_transformation.py

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• Update echopype/utils/mask_transformation.py

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• Update echopype/utils/mask_transformation.py

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• Update echopype/utils/mask_transformation.py

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• Update echopype/utils/mask_transformation.py

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• Cleaned up mask_transformation

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Commits on Aug 29, 2023

• moved files and rerouted importing paths accordingly (#36)

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Commits on Aug 30, 2023

• Feature/add transient noise mask (#35)

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Commits on Aug 31, 2023

• Added extra tests for the utils/mask_transformation module to increase coverage

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Commits on Sep 1, 2023

• Merge branch 'OSOceanAcoustics:main' into feature/add_transient_noise_mask

  mihaiboldeanu

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• Reverted test_mask.py reformating

  mihaiboldeanu

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• Moved impulse and transient noise functions to echopype/clean

  mihaiboldeanu

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• Fixed import order

  mihaiboldeanu

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• Fixed missing import in clean/conftest.py

  mihaiboldeanu

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Commits on Sep 4, 2023

• Moved content of tests/clean/conftest.py to tests/conftest.py

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Commits on Sep 5, 2023

• Refactoring

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Commits on Sep 6, 2023

• Running some linters on the code

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Commits on Sep 13, 2023

• Merge branch 'OSOceanAcoustics:main' into feature/add_transient_noise_mask

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• Fix unused imports in conftest

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• Update echopype/mask/mask_attenuated_signal.py

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Commits on Sep 14, 2023

• Added channel selection to signal attenuation mask

  mihaiboldeanu

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• Merge pull request #43 from OceanStreamIO/feature/add-attenuation-mask

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• Merge branch 'next' into feature/add_transient_noise_mask

  ruxandra-valcu

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Commits on Sep 18, 2023

• Changed parser in parse_azfp.py to maintain consistency over other parsers. (OSOceanAcoustics#1135)

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Commits on Sep 19, 2023

• ci: added support for running individual test files (OSOceanAcoustics#1166)

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Commits on Sep 20, 2023

• Delinting

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Commits on Sep 21, 2023

• refactor(convert): refactor and cleanup parsed2zarr (OSOceanAcoustics#1070)

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• fix(commongrid): improve 'compute_MVBS' using flox [all tests ci] (OSOceanAcoustics#1124)

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Commits on Sep 22, 2023

• ci: Fix run-test.py for module runs (OSOceanAcoustics#1180)

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Commits on Sep 25, 2023

• Merge branch 'dev' into feature/add_transient_noise_mask

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Commits on Sep 26, 2023

• Impulse noise: modified ryan_iterable to use ryan directly

  ruxandra-valcu

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• Impulse noise: renamed medianf

  ruxandra-valcu

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• Consolidating functions

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• Impulse noise refactoring: using a parameter dictionary and a function map

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Commits on Sep 27, 2023

• Frequency filtering

  ruxandra-valcu

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• Frequency filtering (temp add to transient noise and signal attenuation, will refactor)

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• Signal attenuation refactor

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• Transmission noise refactor

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• Impulse noise default params

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• Multichannel noise masks

  ruxandra-valcu

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Commits on Sep 28, 2023

• Made the noise masks able to handle taking a file path as an input

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Commits on Sep 29, 2023

• Merge branch 'next-dev' into merge/add_transient_noise_mask

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Commits on Oct 2, 2023

• Fixed import

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• Fix

  ruxandra-valcu

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• Update conftest.py

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  mihaiboldeanu

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• Update test_noise.py

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