Define strata and period as seperate inputs

ONSdigital · May 21, 2024 · 761c283 · 761c283
1 parent 4bc39c4
commit 761c283
Show file tree

Hide file tree

Showing 2 changed files with 20 additions and 49 deletions.
diff --git a/src/forward_link.py b/src/forward_link.py
@@ -1,65 +1,30 @@
-from typing import List
-
 import numpy as np
 import pandas as pd
 
 
-def mask_values(df: pd.DataFrame, target_variable: str, expr: str) -> pd.Series:
-    """Convert values in a dataframe column to 0 based on a python expression
-
-    Parameters
-    ----------
-    df : pd.Dataframe
-        Pandas dataframe of original data.
-    target_variable : List[str] or str
-        Column name(s) containing target variable(s).
-    query : str
-        The expression to evaluate, see here:
-        https://pandas.pydata.org/pandas-docs/version/1.5/reference/api/pandas.eval.html
-
-    Returns
-    -------
-    df : pd.Series
-
-
-    """
-    masked_column = df[target_variable].copy()
-
-    try:
-        masked_column.loc[~(df.eval(expr))] = np.nan
-
-    except ValueError:
-        print(
-            f"""{expr} is not a valid expression,
-        the code uses ~(df.eval({expr}) to mask the dataframe, please see here:
-        https://pandas.pydata.org/pandas-docs/version/1.5/reference/api/pandas.eval.html
-        """
-        )
-
-    return masked_column
-
-
 def calculate_imputation_link(
     df: pd.DataFrame,
-    groups: List[str] or str,
+    period: str,
+    strata: str,
     match_col: str,
     target_variable: str,
     predictive_variable: str,
 ) -> pd.Series:
     """
-    Calculate link between target_variable and predictive_variable by given groups,
-    a match_col must be supplied which indicates if target_variable and
-    predictive_variable can be linked.
+    Calculate link between target_variable and predictive_variable by strata,
+    a match_col must be supplied which indicates if target_variable
+    and predictive_variable can be linked.
 
     Parameters
     ----------
     df : pd.Dataframe
         Original dataframe.
-    groups : List[str] or str
-        Column name(s) to calculate the sums.
+    period : str
+        Column name containing time period.
+    strata : str
+        Column name containing strata information (sic).
     match_col : str
-        Column of the matched pair links, this column should be bool,
-        or 0 and 1.
+        Column name of the matched pair links, this column should be bool.
     target_variable : str
         Column name of the targeted variable.
     predictive_variable : str
@@ -81,9 +46,13 @@ def calculate_imputation_link(
         df_intermediate[predictive_variable] * df_intermediate[match_col]
     )
 
-    numerator = df_intermediate.groupby(groups)[target_variable].transform("sum")
+    numerator = df_intermediate.groupby([strata, period])[target_variable].transform(
+        "sum"
+    )
 
-    denominator = df_intermediate.groupby(groups)[predictive_variable].transform("sum")
+    denominator = df_intermediate.groupby([strata, period])[
+        predictive_variable
+    ].transform("sum")
 
     denominator.replace(0, np.nan, inplace=True)  # cover division with 0
 

diff --git a/tests/test_forward_link.py b/tests/test_forward_link.py
@@ -18,7 +18,8 @@ def test_forward_links(self, scenario):
 
         link_to_test = calculate_imputation_link(
             df_input,
-            ["group", "period"],
+            "period",
+            "group",
             "f_matched_pair",
             "question",
             "f_predictive_question",
@@ -35,7 +36,8 @@ def test_back_links(self, scenario):
 
         link_to_test = calculate_imputation_link(
             df_input,
-            ["group", "period"],
+            "period",
+            "group",
             "b_matched_pair",
             "question",
             "b_predictive_question",