🚀 Automatically rebuilt derived files (#2419)

Co-authored-by: GitHub Action <[email protected]>
OBOFoundry · Aug 18, 2023 · e36d30e · e36d30e
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diff --git a/_config.yml b/_config.yml
@@ -4914,35 +4914,6 @@ ontologies:
   repository: https://github.com/OHPI/ohpi
   title: Ontology of Host Pathogen Interactions
   tracker: https://github.com/OHPI/ohpi/issues
-- activity_status: active
-  build:
-    method: obo2owl
-    source_url: https://raw.githubusercontent.com/obophenotype/developmental-stage-ontologies/master/src/olatdv/olatdv.obo
-  contact:
-    email: [email protected]
-    github: fbastian
-    label: Frédéric Bastian
-    orcid: 0000-0002-9415-5104
-  description: Life cycle stages for Medaka
-  domain: anatomy and development
-  homepage: https://github.com/obophenotype/developmental-stage-ontologies/wiki/OlatDv
-  id: olatdv
-  layout: ontology_detail
-  license:
-    label: CC BY 3.0
-    logo: http://mirrors.creativecommons.org/presskit/buttons/80x15/png/by.png
-    url: http://creativecommons.org/licenses/by/3.0/
-  ontology_purl: http://purl.obolibrary.org/obo/olatdv.owl
-  page: https://github.com/obophenotype/developmental-stage-ontologies
-  preferredPrefix: OlatDv
-  products:
-  - id: olatdv.obo
-    ontology_purl: http://purl.obolibrary.org/obo/olatdv.obo
-  - id: olatdv.owl
-    ontology_purl: http://purl.obolibrary.org/obo/olatdv.owl
-  repository: https://github.com/obophenotype/developmental-stage-ontologies
-  title: Medaka Developmental Stages
-  tracker: https://github.com/obophenotype/developmental-stage-ontologies/issues
 - activity_status: active
   contact:
     email: [email protected]
@@ -5541,35 +5512,6 @@ ontologies:
   - clinical documentation
   title: The Prescription of Drugs Ontology
   tracker: https://github.com/OpenLHS/PDRO/issues
-- activity_status: active
-  build:
-    method: obo2owl
-    source_url: https://raw.githubusercontent.com/obophenotype/developmental-stage-ontologies/master/src/pdumdv/pdumdv.obo
-  contact:
-    email: [email protected]
-    github: fbastian
-    label: Frédéric Bastian
-    orcid: 0000-0002-9415-5104
-  description: Life cycle stages for Platynereis dumerilii
-  domain: anatomy and development
-  homepage: https://github.com/obophenotype/developmental-stage-ontologies/wiki/PdumDv
-  id: pdumdv
-  layout: ontology_detail
-  license:
-    label: CC BY 3.0
-    logo: http://mirrors.creativecommons.org/presskit/buttons/80x15/png/by.png
-    url: http://creativecommons.org/licenses/by/3.0/
-  ontology_purl: http://purl.obolibrary.org/obo/pdumdv.owl
-  page: https://github.com/obophenotype/developmental-stage-ontologies
-  preferredPrefix: PdumDv
-  products:
-  - id: pdumdv.owl
-    ontology_purl: http://purl.obolibrary.org/obo/pdumdv.owl
-  - id: pdumdv.obo
-    ontology_purl: http://purl.obolibrary.org/obo/pdumdv.obo
-  repository: https://github.com/obophenotype/developmental-stage-ontologies
-  title: Platynereis Developmental Stages
-  tracker: https://github.com/obophenotype/developmental-stage-ontologies/issues
 - activity_status: active
   contact:
     email: [email protected]
@@ -8321,6 +8263,64 @@ ontologies:
   repository: https://github.com/carrineblank/MicrO
   title: Ontology of Prokaryotic Phenotypic and Metabolic Characters
   tracker: https://github.com/carrineblank/MicrO/issues
+- activity_status: inactive
+  build:
+    method: obo2owl
+    source_url: https://raw.githubusercontent.com/obophenotype/developmental-stage-ontologies/master/src/olatdv/olatdv.obo
+  contact:
+    email: [email protected]
+    github: fbastian
+    label: Frédéric Bastian
+    orcid: 0000-0002-9415-5104
+  description: Life cycle stages for Medaka
+  domain: anatomy and development
+  homepage: https://github.com/obophenotype/developmental-stage-ontologies/wiki/OlatDv
+  id: olatdv
+  layout: ontology_detail
+  license:
+    label: CC BY 3.0
+    logo: http://mirrors.creativecommons.org/presskit/buttons/80x15/png/by.png
+    url: http://creativecommons.org/licenses/by/3.0/
+  ontology_purl: http://purl.obolibrary.org/obo/olatdv.owl
+  page: https://github.com/obophenotype/developmental-stage-ontologies
+  preferredPrefix: OlatDv
+  products:
+  - id: olatdv.obo
+    ontology_purl: http://purl.obolibrary.org/obo/olatdv.obo
+  - id: olatdv.owl
+    ontology_purl: http://purl.obolibrary.org/obo/olatdv.owl
+  repository: https://github.com/obophenotype/developmental-stage-ontologies
+  title: Medaka Developmental Stages
+  tracker: https://github.com/obophenotype/developmental-stage-ontologies/issues
+- activity_status: inactive
+  build:
+    method: obo2owl
+    source_url: https://raw.githubusercontent.com/obophenotype/developmental-stage-ontologies/master/src/pdumdv/pdumdv.obo
+  contact:
+    email: [email protected]
+    github: fbastian
+    label: Frédéric Bastian
+    orcid: 0000-0002-9415-5104
+  description: Life cycle stages for Platynereis dumerilii
+  domain: anatomy and development
+  homepage: https://github.com/obophenotype/developmental-stage-ontologies/wiki/PdumDv
+  id: pdumdv
+  layout: ontology_detail
+  license:
+    label: CC BY 3.0
+    logo: http://mirrors.creativecommons.org/presskit/buttons/80x15/png/by.png
+    url: http://creativecommons.org/licenses/by/3.0/
+  ontology_purl: http://purl.obolibrary.org/obo/pdumdv.owl
+  page: https://github.com/obophenotype/developmental-stage-ontologies
+  preferredPrefix: PdumDv
+  products:
+  - id: pdumdv.owl
+    ontology_purl: http://purl.obolibrary.org/obo/pdumdv.owl
+  - id: pdumdv.obo
+    ontology_purl: http://purl.obolibrary.org/obo/pdumdv.obo
+  repository: https://github.com/obophenotype/developmental-stage-ontologies
+  title: Platynereis Developmental Stages
+  tracker: https://github.com/obophenotype/developmental-stage-ontologies/issues
 - activity_status: inactive
   build:
     checkout: git clone https://github.com/obophenotype/human-developmental-anatomy-ontology.git

diff --git a/registry/obo_prefixes.ttl b/registry/obo_prefixes.ttl
@@ -118,7 +118,6 @@
 ,[ sh:prefix "OHD" ; sh:namespace "http://purl.obolibrary.org/obo/OHD_"]
 ,[ sh:prefix "OHMI" ; sh:namespace "http://purl.obolibrary.org/obo/OHMI_"]
 ,[ sh:prefix "OHPI" ; sh:namespace "http://purl.obolibrary.org/obo/OHPI_"]
-,[ sh:prefix "OlatDv" ; sh:namespace "http://purl.obolibrary.org/obo/OlatDv_"]
 ,[ sh:prefix "OMIT" ; sh:namespace "http://purl.obolibrary.org/obo/OMIT_"]
 ,[ sh:prefix "OMO" ; sh:namespace "http://purl.obolibrary.org/obo/OMO_"]
 ,[ sh:prefix "OMP" ; sh:namespace "http://purl.obolibrary.org/obo/OMP_"]
@@ -136,7 +135,6 @@
 ,[ sh:prefix "PCL" ; sh:namespace "http://purl.obolibrary.org/obo/PCL_"]
 ,[ sh:prefix "PCO" ; sh:namespace "http://purl.obolibrary.org/obo/PCO_"]
 ,[ sh:prefix "PDRO" ; sh:namespace "http://purl.obolibrary.org/obo/PDRO_"]
-,[ sh:prefix "PdumDv" ; sh:namespace "http://purl.obolibrary.org/obo/PdumDv_"]
 ,[ sh:prefix "PECO" ; sh:namespace "http://purl.obolibrary.org/obo/PECO_"]
 ,[ sh:prefix "PHIPO" ; sh:namespace "http://purl.obolibrary.org/obo/PHIPO_"]
 ,[ sh:prefix "PLANA" ; sh:namespace "http://purl.obolibrary.org/obo/PLANA_"]
@@ -194,6 +192,8 @@
 ,[ sh:prefix "SIBO" ; sh:namespace "http://purl.obolibrary.org/obo/SIBO_"]
 ,[ sh:prefix "VariO" ; sh:namespace "http://purl.obolibrary.org/obo/VariO_"]
 ,[ sh:prefix "MICRO" ; sh:namespace "http://purl.obolibrary.org/obo/MICRO_"]
+,[ sh:prefix "OlatDv" ; sh:namespace "http://purl.obolibrary.org/obo/OlatDv_"]
+,[ sh:prefix "PdumDv" ; sh:namespace "http://purl.obolibrary.org/obo/PdumDv_"]
 ,[ sh:prefix "AEO" ; sh:namespace "http://purl.obolibrary.org/obo/AEO_"]
 ,[ sh:prefix "CEPH" ; sh:namespace "http://purl.obolibrary.org/obo/CEPH_"]
 ,[ sh:prefix "EHDAA2" ; sh:namespace "http://purl.obolibrary.org/obo/EHDAA2_"]

diff --git a/registry/ontologies.jsonld b/registry/ontologies.jsonld
@@ -6841,45 +6841,6 @@
             "title": "Ontology of Host Pathogen Interactions",
             "tracker": "https://github.com/OHPI/ohpi/issues"
         },
-        {
-            "activity_status": "active",
-            "build": {
-                "method": "obo2owl",
-                "source_url": "https://raw.githubusercontent.com/obophenotype/developmental-stage-ontologies/master/src/olatdv/olatdv.obo"
-            },
-            "contact": {
-                "email": "[email protected]",
-                "github": "fbastian",
-                "label": "Frédéric Bastian",
-                "orcid": "0000-0002-9415-5104"
-            },
-            "description": "Life cycle stages for Medaka",
-            "domain": "anatomy and development",
-            "homepage": "https://github.com/obophenotype/developmental-stage-ontologies/wiki/OlatDv",
-            "id": "olatdv",
-            "layout": "ontology_detail",
-            "license": {
-                "label": "CC BY 3.0",
-                "logo": "http://mirrors.creativecommons.org/presskit/buttons/80x15/png/by.png",
-                "url": "http://creativecommons.org/licenses/by/3.0/"
-            },
-            "ontology_purl": "http://purl.obolibrary.org/obo/olatdv.owl",
-            "page": "https://github.com/obophenotype/developmental-stage-ontologies",
-            "preferredPrefix": "OlatDv",
-            "products": [
-                {
-                    "id": "olatdv.obo",
-                    "ontology_purl": "http://purl.obolibrary.org/obo/olatdv.obo"
-                },
-                {
-                    "id": "olatdv.owl",
-                    "ontology_purl": "http://purl.obolibrary.org/obo/olatdv.owl"
-                }
-            ],
-            "repository": "https://github.com/obophenotype/developmental-stage-ontologies",
-            "title": "Medaka Developmental Stages",
-            "tracker": "https://github.com/obophenotype/developmental-stage-ontologies/issues"
-        },
         {
             "activity_status": "active",
             "contact": {
@@ -7744,45 +7705,6 @@
             "title": "The Prescription of Drugs Ontology",
             "tracker": "https://github.com/OpenLHS/PDRO/issues"
         },
-        {
-            "activity_status": "active",
-            "build": {
-                "method": "obo2owl",
-                "source_url": "https://raw.githubusercontent.com/obophenotype/developmental-stage-ontologies/master/src/pdumdv/pdumdv.obo"
-            },
-            "contact": {
-                "email": "[email protected]",
-                "github": "fbastian",
-                "label": "Frédéric Bastian",
-                "orcid": "0000-0002-9415-5104"
-            },
-            "description": "Life cycle stages for Platynereis dumerilii",
-            "domain": "anatomy and development",
-            "homepage": "https://github.com/obophenotype/developmental-stage-ontologies/wiki/PdumDv",
-            "id": "pdumdv",
-            "layout": "ontology_detail",
-            "license": {
-                "label": "CC BY 3.0",
-                "logo": "http://mirrors.creativecommons.org/presskit/buttons/80x15/png/by.png",
-                "url": "http://creativecommons.org/licenses/by/3.0/"
-            },
-            "ontology_purl": "http://purl.obolibrary.org/obo/pdumdv.owl",
-            "page": "https://github.com/obophenotype/developmental-stage-ontologies",
-            "preferredPrefix": "PdumDv",
-            "products": [
-                {
-                    "id": "pdumdv.owl",
-                    "ontology_purl": "http://purl.obolibrary.org/obo/pdumdv.owl"
-                },
-                {
-                    "id": "pdumdv.obo",
-                    "ontology_purl": "http://purl.obolibrary.org/obo/pdumdv.obo"
-                }
-            ],
-            "repository": "https://github.com/obophenotype/developmental-stage-ontologies",
-            "title": "Platynereis Developmental Stages",
-            "tracker": "https://github.com/obophenotype/developmental-stage-ontologies/issues"
-        },
         {
             "activity_status": "active",
             "contact": {
@@ -11679,6 +11601,84 @@
             "title": "Ontology of Prokaryotic Phenotypic and Metabolic Characters",
             "tracker": "https://github.com/carrineblank/MicrO/issues"
         },
+        {
+            "activity_status": "inactive",
+            "build": {
+                "method": "obo2owl",
+                "source_url": "https://raw.githubusercontent.com/obophenotype/developmental-stage-ontologies/master/src/olatdv/olatdv.obo"
+            },
+            "contact": {
+                "email": "[email protected]",
+                "github": "fbastian",
+                "label": "Frédéric Bastian",
+                "orcid": "0000-0002-9415-5104"
+            },
+            "description": "Life cycle stages for Medaka",
+            "domain": "anatomy and development",
+            "homepage": "https://github.com/obophenotype/developmental-stage-ontologies/wiki/OlatDv",
+            "id": "olatdv",
+            "layout": "ontology_detail",
+            "license": {
+                "label": "CC BY 3.0",
+                "logo": "http://mirrors.creativecommons.org/presskit/buttons/80x15/png/by.png",
+                "url": "http://creativecommons.org/licenses/by/3.0/"
+            },
+            "ontology_purl": "http://purl.obolibrary.org/obo/olatdv.owl",
+            "page": "https://github.com/obophenotype/developmental-stage-ontologies",
+            "preferredPrefix": "OlatDv",
+            "products": [
+                {
+                    "id": "olatdv.obo",
+                    "ontology_purl": "http://purl.obolibrary.org/obo/olatdv.obo"
+                },
+                {
+                    "id": "olatdv.owl",
+                    "ontology_purl": "http://purl.obolibrary.org/obo/olatdv.owl"
+                }
+            ],
+            "repository": "https://github.com/obophenotype/developmental-stage-ontologies",
+            "title": "Medaka Developmental Stages",
+            "tracker": "https://github.com/obophenotype/developmental-stage-ontologies/issues"
+        },
+        {
+            "activity_status": "inactive",
+            "build": {
+                "method": "obo2owl",
+                "source_url": "https://raw.githubusercontent.com/obophenotype/developmental-stage-ontologies/master/src/pdumdv/pdumdv.obo"
+            },
+            "contact": {
+                "email": "[email protected]",
+                "github": "fbastian",
+                "label": "Frédéric Bastian",
+                "orcid": "0000-0002-9415-5104"
+            },
+            "description": "Life cycle stages for Platynereis dumerilii",
+            "domain": "anatomy and development",
+            "homepage": "https://github.com/obophenotype/developmental-stage-ontologies/wiki/PdumDv",
+            "id": "pdumdv",
+            "layout": "ontology_detail",
+            "license": {
+                "label": "CC BY 3.0",
+                "logo": "http://mirrors.creativecommons.org/presskit/buttons/80x15/png/by.png",
+                "url": "http://creativecommons.org/licenses/by/3.0/"
+            },
+            "ontology_purl": "http://purl.obolibrary.org/obo/pdumdv.owl",
+            "page": "https://github.com/obophenotype/developmental-stage-ontologies",
+            "preferredPrefix": "PdumDv",
+            "products": [
+                {
+                    "id": "pdumdv.owl",
+                    "ontology_purl": "http://purl.obolibrary.org/obo/pdumdv.owl"
+                },
+                {
+                    "id": "pdumdv.obo",
+                    "ontology_purl": "http://purl.obolibrary.org/obo/pdumdv.obo"
+                }
+            ],
+            "repository": "https://github.com/obophenotype/developmental-stage-ontologies",
+            "title": "Platynereis Developmental Stages",
+            "tracker": "https://github.com/obophenotype/developmental-stage-ontologies/issues"
+        },
         {
             "activity_status": "inactive",
             "build": {