Merge pull request #34553 from NixOS/python-unstable

Python package updates
NixOS · Feb 4, 2018 · c1d7950 · c1d7950
2 parents 34b7ea6 + aaa50d5
commit c1d7950
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Showing 69 changed files with 538 additions and 424 deletions.
diff --git a/pkgs/applications/science/spyder/default.nix b/pkgs/applications/science/spyder/default.nix
@@ -1,7 +1,7 @@
 { stdenv, fetchPypi, unzip, buildPythonApplication, makeDesktopItem
 # mandatory
-, qtpy, numpydoc, qtconsole, qtawesome, jedi, pycodestyle, psutil
-, pyflakes, rope, sphinx, nbconvert, mccabe
+, numpydoc, qtconsole, qtawesome, jedi, pycodestyle, psutil
+, pyflakes, rope, sphinx, nbconvert, mccabe, pyopengl, cloudpickle
 # optional
 , numpy ? null, scipy ? null, matplotlib ? null
 # optional
@@ -10,17 +10,21 @@
 
 buildPythonApplication rec {
   pname = "spyder";
-  version = "3.2.4";
-  namePrefix = "";
+  version = "3.2.6";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "028hg71gfq2yrplwhhl7hl4rbwji1l0zxzghblwmb0i443ki10v3";
+    sha256 = "87d6a4f5ee1aac4284461ee3584c3ade50cb53feb3fe35abebfdfb9be18c526a";
   };
 
+  # Somehow setuptools can't find pyqt5. Maybe because the dist-info folder is missing?
+  postPatch = ''
+    substituteInPlace setup.py --replace 'pyqt5;python_version>="3"' ' '
+  '';
+
   propagatedBuildInputs = [
-    jedi pycodestyle psutil qtpy pyflakes rope numpy scipy matplotlib pylint
-    numpydoc qtconsole qtawesome nbconvert mccabe
+    jedi pycodestyle psutil pyflakes rope numpy scipy matplotlib pylint
+    numpydoc qtconsole qtawesome nbconvert mccabe pyopengl cloudpickle
   ];
 
   # There is no test for spyder

diff --git a/pkgs/development/python-modules/adal/default.nix b/pkgs/development/python-modules/adal/default.nix
@@ -3,12 +3,12 @@
 
 buildPythonPackage rec {
   pname = "adal";
-  version = "0.4.7";
+  version = "0.5.0";
   name = "${pname}-${version}";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "114046ac85d0054791c21b00922f26286822bc6f2ba3716db42e7e57f762ef20";
+    sha256 = "120821f72ca9d59a7c7197fc14d0e27448ff8d331fae230f92d713b9b5c721f7";
   };
 
   propagatedBuildInputs =  [ requests pyjwt dateutil ];

diff --git a/pkgs/development/python-modules/agate-excel/default.nix b/pkgs/development/python-modules/agate-excel/default.nix
@@ -3,11 +3,11 @@
 buildPythonPackage rec {
     name = "${pname}-${version}";
     pname = "agate-excel";
-    version = "0.2.1";
+    version = "0.2.2";
 
     src = fetchPypi {
       inherit pname version;
-      sha256 = "1d28s01a0a8n8rdrd78w88cqgl3lawzy38h9afwm0iks618i0qn7";
+      sha256 = "8923f71ee2b5b7b21e52fb314a769b28fb902f647534f5cbbb41991d8710f4c7";
     };
 
     propagatedBuildInputs = [ agate openpyxl xlrd ];

diff --git a/pkgs/development/python-modules/agate-sql/default.nix b/pkgs/development/python-modules/agate-sql/default.nix
@@ -3,11 +3,11 @@
 buildPythonPackage rec {
     name = "${pname}-${version}";
     pname = "agate-sql";
-    version = "0.5.2";
+    version = "0.5.3";
 
     src = fetchPypi {
       inherit pname version;
-      sha256 = "0qlfwql6fnbs0r1rj7nxv4n5scad53b8dlh4qv6gyklvdk3wwn14";
+      sha256 = "877b7b85adb5f0325455bba8d50a1623fa32af33680b554feca7c756a15ad9b4";
     };
 
     propagatedBuildInputs = [ agate sqlalchemy ];

diff --git a/pkgs/development/python-modules/ansicolor/default.nix b/pkgs/development/python-modules/ansicolor/default.nix
@@ -2,12 +2,12 @@
 
 buildPythonPackage rec {
   pname = "ansicolor";
-  version = "0.2.4";
+  version = "0.2.6";
   name = "${pname}-${version}";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "0zlkk9706xn5yshwzdn8xsfkim8iv44zsl6qjwg2f4gn62rqky1h";
+    sha256 = "d17e1b07b9dd7ded31699fbca53ae6cd373584f9b6dcbc124d1f321ebad31f1d";
   };
 
   meta = with stdenv.lib; {

diff --git a/pkgs/development/python-modules/asgiref/default.nix b/pkgs/development/python-modules/asgiref/default.nix
@@ -1,12 +1,12 @@
 { stdenv, buildPythonPackage, fetchurl, six }:
 buildPythonPackage rec {
-  version = "2.1.0";
+  version = "2.1.1";
   pname = "asgiref";
   name = "${pname}-${version}";
 
   src = fetchurl {
     url = "mirror://pypi/a/asgiref/${name}.tar.gz";
-    sha256 = "2bfd70fcc51df4036768b91d7b13524090dc8f366d79fa44ba2b0aeb47306344";
+    sha256 = "112828022d772925b47b22caf8108dadd3b26bb0af719eb01b2c3a807795429d";
   };
 
   propagatedBuildInputs = [ six ];

diff --git a/pkgs/development/python-modules/astroid/default.nix b/pkgs/development/python-modules/astroid/default.nix
@@ -6,11 +6,11 @@
 buildPythonPackage rec {
   name = "${pname}-${version}";
   pname = "astroid";
-  version = "1.6.0";
+  version = "1.6.1";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "71dadba2110008e2c03f9fde662ddd2053db3c0489d0e03c94e828a0399edd4f";
+    sha256 = "f0a0e386dbca9f93ea9f3ea6f32b37a24720502b7baa9cb17c3976a680d43a06";
   };
 
   propagatedBuildInputs = [ logilab_common six lazy-object-proxy wrapt ]

diff --git a/pkgs/development/python-modules/autopep8/default.nix b/pkgs/development/python-modules/autopep8/default.nix
@@ -2,12 +2,12 @@
 
 buildPythonPackage rec {
   pname = "autopep8";
-  version = "1.3.3";
+  version = "1.3.4";
   name = "${pname}-${version}";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "0c1gl648g2xnz3j0rsp71ld4i32zlglmqjvqf4q8r08jp3zpny7z";
+    sha256 = "c7be71ab0cb2f50c9c22c82f0c9acaafc6f57492c3fbfee9790c415005c2b9a5";
   };
 
   propagatedBuildInputs = [ pycodestyle ];

diff --git a/pkgs/development/python-modules/botocore/default.nix b/pkgs/development/python-modules/botocore/default.nix
@@ -12,11 +12,11 @@
 buildPythonPackage rec {
   name = "${pname}-${version}";
   pname = "botocore";
-  version = "1.8.33";
+  version = "1.8.36";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "fa29ea54f26b1193682332d3b4cdde7aa79b4eaccb23f70e88672509c24546f4";
+    sha256 = "b2c9e0fd6d14910f759a33c19f8315dddedbb3c5569472b7be7ceed4f001a675";
   };
 
   propagatedBuildInputs = [

diff --git a/pkgs/development/python-modules/buildout-nix/default.nix b/pkgs/development/python-modules/buildout-nix/default.nix
@@ -2,12 +2,12 @@
 
 buildPythonPackage rec {
   pname = "zc.buildout";
-  version = "2.10.0";
+  version = "2.11.0";
   name = "${pname}-nix-${version}";
 
   src = fetchurl {
     url = "mirror://pypi/${builtins.substring 0 1 pname}/${pname}/${pname}-${version}.tar.gz";
-    sha256 = "00wi0f6wpfl2gywr02x2yqvx6i1k0ll5w4lhdl0khijk4g7mk8dq";
+    sha256 = "092b0a147d5fb4e79ee0afde665570f85738e714463854f9e4f7f38d0b27ea82";
   };
 
   patches = [ ./nix.patch ];

diff --git a/pkgs/development/python-modules/chainer/default.nix b/pkgs/development/python-modules/chainer/default.nix
@@ -6,11 +6,11 @@
 
 buildPythonPackage rec {
   pname = "chainer";
-  version = "3.2.0";
+  version = "3.3.0";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "0mbc8kwk7pvg03bf0j57a48gr6rsdg4lzmyj0dak8y2l4lmyskpw";
+    sha256 = "0669375e5b09d687781a37d6c025ee0a6015f575b4d2c70a2ad09c33b8228f86";
   };
 
   checkInputs = [

diff --git a/pkgs/development/python-modules/channels/default.nix b/pkgs/development/python-modules/channels/default.nix
@@ -4,11 +4,11 @@
 buildPythonPackage rec {
   pname = "channels";
   name = "${pname}-${version}";
-  version = "1.1.8";
+  version = "2.0.0";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "0gsy3hwn1vd709jkw8ay44qrm6aw7qggr312z8xwzq0x4ihjda02";
+    sha256 = "c365492b90bd936c763e06cd76bda96cd3e70e5a5d2a196c25754e0c1d8da85a";
   };
 
   # Files are missing in the distribution

diff --git a/pkgs/development/python-modules/click-threading/default.nix b/pkgs/development/python-modules/click-threading/default.nix
@@ -9,11 +9,11 @@
 
 buildPythonPackage rec {
   pname = "click-threading";
-  version = "0.4.2";
+  version = "0.4.4";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "400b0bb63d9096b6bf2806efaf742a1cc8b6c88e0484f0afe7d7a7f0e9870609";
+    sha256 = "b2b0fada5bf184b56afaccc99d0d2548d8ab07feb2e95e29e490f6b99c605de7";
   };
 
   checkInputs = [ pytest ];

diff --git a/pkgs/development/python-modules/cryptography/default.nix b/pkgs/development/python-modules/cryptography/default.nix
@@ -0,0 +1,67 @@
+{ stdenv
+, buildPythonPackage
+, fetchPypi
+, openssl
+, cryptography_vectors
+, darwin
+, idna
+, asn1crypto
+, packaging
+, six
+, pythonOlder
+, enum34
+, ipaddress
+, isPyPy
+, cffi
+, pytest
+, pretend
+, iso8601
+, pytz
+, hypothesis
+}:
+
+let
+  version = "2.1.4";
+in assert version == cryptography_vectors.version; buildPythonPackage rec {
+  # also bump cryptography_vectors
+  pname = "cryptography";
+  inherit version;
+
+  src = fetchPypi {
+    inherit pname version;
+    sha256 = "e4d967371c5b6b2e67855066471d844c5d52d210c36c28d49a8507b96e2c5291";
+  };
+
+  outputs = [ "out" "dev" ];
+
+  buildInputs = [ openssl cryptography_vectors ]
+             ++ stdenv.lib.optional stdenv.isDarwin darwin.apple_sdk.frameworks.Security;
+  propagatedBuildInputs = [
+    idna
+    asn1crypto
+    packaging
+    six
+  ] ++ stdenv.lib.optional (pythonOlder "3.4") enum34
+  ++ stdenv.lib.optional (pythonOlder "3.3") ipaddress
+  ++ stdenv.lib.optional (!isPyPy) cffi;
+
+  checkInputs = [
+    pytest
+    pretend
+    iso8601
+    pytz
+    hypothesis
+  ];
+
+  # The test assumes that if we're on Sierra or higher, that we use `getentropy`, but for binary
+  # compatibility with pre-Sierra for binary caches, we hide that symbol so the library doesn't
+  # use it. This boils down to them checking compatibility with `getentropy` in two different places,
+  # so let's neuter the second test.
+  postPatch = ''
+    substituteInPlace ./tests/hazmat/backends/test_openssl.py --replace '"16.0"' '"99.0"'
+  '';
+
+  # IOKit's dependencies are inconsistent between OSX versions, so this is the best we
+  # can do until nix 1.11's release
+  __impureHostDeps = [ "/usr/lib" ];
+}
diff --git a/pkgs/development/python-modules/cryptography_vectors/default.nix b/pkgs/development/python-modules/cryptography_vectors/default.nix
@@ -0,0 +1,18 @@
+{ buildPythonPackage
+, fetchPypi
+, cryptography
+}:
+
+buildPythonPackage rec {
+  # also bump cryptography
+  pname = "cryptography_vectors";
+  version = "2.1.4";
+
+  src = fetchPypi {
+    inherit pname version;
+    sha256 = "78c4b4f3f84853ea5d038e2f53d355229dd8119fe9cf949c3e497c85c760a5ca";
+  };
+
+  # No tests included
+  doCheck = false;
+}
diff --git a/pkgs/development/python-modules/cupy/default.nix b/pkgs/development/python-modules/cupy/default.nix
@@ -6,11 +6,11 @@
 
 buildPythonPackage rec {
   pname = "cupy";
-  version = "2.2.0";
+  version = "2.3.0";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "0si0ri8azxvxh3lpm4l4g60jf4nwzibi53yldbdbzb1svlqq060r";
+    sha256 = "7426f6332cb01513d2a6a687792dfa17c678ff64dd1b19b04559ddd5672c833f";
   };
 
   checkInputs = [

diff --git a/pkgs/development/python-modules/daphne/default.nix b/pkgs/development/python-modules/daphne/default.nix
@@ -4,11 +4,11 @@
 buildPythonPackage rec {
   pname = "daphne";
   name = "${pname}-${version}";
-  version = "1.4.2";
+  version = "2.0.0";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "302725f223853b05688f28c361e050f8db9568b1ce27340c76272c26b49e6d72";
+    sha256 = "ecd43a2dd889fb74e16bf8b7f67c076c4ec1b36229ce782272e46c50d56174dd";
   };
 
   buildInputs = [ hypothesis ];

diff --git a/pkgs/development/python-modules/dicttoxml/default.nix b/pkgs/development/python-modules/dicttoxml/default.nix
@@ -0,0 +1,23 @@
+{ lib
+, buildPythonPackage
+, fetchPypi
+}:
+
+buildPythonPackage rec {
+  pname = "dicttoxml";
+  version = "1.7.4";
+
+  src = fetchPypi {
+    inherit pname version;
+    sha256 = "ea44cc4ec6c0f85098c57a431a1ee891b3549347b07b7414c8a24611ecf37e45";
+  };
+
+  # No tests in archive
+  doCheck = false;
+
+  meta = {
+    description = "Converts a Python dictionary or other native data type into a valid XML string";
+    homepage = https://github.com/quandyfactory/dicttoxml;
+    license = lib.licenses.gpl2;
+  };
+}
diff --git a/pkgs/development/python-modules/django-polymorphic/default.nix b/pkgs/development/python-modules/django-polymorphic/default.nix
@@ -2,12 +2,12 @@
 
 buildPythonPackage rec {
   pname = "django-polymorphic";
-  version = "1.3";
+  version = "2.0";
   name = "${pname}-${version}";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "8737b465ebf5fad772b4c52272189c352f5904f468d298584a3469187e3207ad";
+    sha256 = "78f666149ea10cdda08ac6c25ddf4b4e582ee380be87e7968bfed008ef39dfa5";
   };
 
   checkInputs = [ django ];

diff --git a/pkgs/development/python-modules/docker/default.nix b/pkgs/development/python-modules/docker/default.nix
@@ -3,13 +3,13 @@
 , ipaddress, backports_ssl_match_hostname, docker_pycreds
 }:
 buildPythonPackage rec {
-  version = "2.7.0";
+  version = "3.0.0";
   pname = "docker";
   name = "${pname}-${version}";
 
   src = fetchurl {
     url = "mirror://pypi/d/docker/${name}.tar.gz";
-    sha256 = "144248308e8ea31c4863c6d74e1b55daf97cc190b61d0fe7b7313ab920d6a76c";
+    sha256 = "4a1083656c6ac7615c19094d9b5e052f36e38d0b07e63d7e506c9b5b32c3abe2";
   };
 
   propagatedBuildInputs = [

diff --git a/pkgs/development/python-modules/edward/default.nix b/pkgs/development/python-modules/edward/default.nix
@@ -3,14 +3,14 @@
 
 buildPythonPackage rec {
   pname = "edward";
-  version = "1.3.4";
+  version = "1.3.5";
   name  = "${pname}-${version}";
 
   disabled = !(isPy27 || pythonAtLeast "3.4");
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "10d6d7886235f4b9fa4ba401daef87c27937a04d2763f507643d730e51de37b6";
+    sha256 = "3818b39e77c26fc1a37767a74fdd5e7d02877d75ed901ead2f40bd03baaa109f";
   };
 
   # disabled for now due to Tensorflow trying to create files in $HOME: