Add IO to read MonkeyLogic files

neo/io/__init__.py

@@ -40,6 +40,7 @@
 * :attr:`KwikIO`
 * :attr:`MaxwellIO`
 * :attr:`MicromedIO`
+* :attr:`MonkeyLogicIO`
 * :attr:`NeoMatlabIO`
 * :attr:`NestIO`
 * :attr:`NeuralynxIO`
@@ -169,6 +170,10 @@
 
     .. autoattribute:: extensions
 
+.. autoclass:: neo.io.MonkeyLogicIO
+
+    .. autoattribute:: extensions
+
 .. autoclass:: neo.io.NeoMatlabIO
 
     .. autoattribute:: extensions
@@ -309,6 +314,7 @@
 from neo.io.mearecio import MEArecIO
 from neo.io.maxwellio import MaxwellIO
 from neo.io.micromedio import MicromedIO
+from neo.io.monkeylogicio import MonkeyLogicIO
 from neo.io.neomatlabio import NeoMatlabIO
 from neo.io.nestio import NestIO
 from neo.io.neuralynxio import NeuralynxIO
@@ -361,7 +367,8 @@
     MEArecIO,
     MaxwellIO,
     MicromedIO,
-    NixIO,
+    MonkeyLogicIO,
+    NixIO,  # place NixIO before other IOs that use HDF5 to make it the default for .h5 files
     NixIOFr,
     NeoMatlabIO,
     NestIO,

neo/io/monkeylogicio.py

@@ -0,0 +1,27 @@
+from neo.io.basefromrawio import BaseFromRaw
+from neo.rawio.monkeylogicrawio import MonkeyLogicRawIO
+import warnings
+
+class MonkeyLogicIO(MonkeyLogicRawIO, BaseFromRaw):
+
+    name = 'MonkeyLogicIO'
+
+    _prefered_signal_group_mode = 'group-by-same-units'
+    _prefered_units_group_mode = 'all-in-one'
+
+    def __init__(self, filename):
+        MonkeyLogicRawIO.__init__(self, filename)
+        BaseFromRaw.__init__(self, filename)
+
+    def read_block(self, block_index=0, lazy=False,
+                    create_group_across_segment=None,
+                    signal_group_mode=None, load_waveforms=False):
+
+        if lazy:
+            warnings.warn('Lazy loading is not supported by MonkeyLogicIO. '
+                          'Ignoring `lazy=True` parameter.')
+
+        return BaseFromRaw.read_block(self, block_index=block_index, lazy=False,
+                                      create_group_across_segment=create_group_across_segment,
+                                      signal_group_mode=signal_group_mode,
+                                      load_waveforms=load_waveforms)