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Enh/add doctest runner #503

Merged
merged 61 commits into from
Feb 16, 2023
Merged

Enh/add doctest runner #503

merged 61 commits into from
Feb 16, 2023

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Moritz-Alexander-Kern
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@Moritz-Alexander-Kern Moritz-Alexander-Kern commented Jul 18, 2022 •
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CI workflow doctests

added workflow to run doctests on all examles

merge after PR #502 .

Moritz-Alexander-Kern added 30 commits July 7, 2022 10:17
fixed asset doctest formatting
f32a43f
fixed doctests in granger.py
0007840
fixed granger doctest np.random.seed
6142702
fix datasets.py example
0a90a50
fixed doctests in gpfa.py
0c594c1
fix doctest signal_processing.py
626e85b
display plot from elephant.signal_processing.cross_correlation_function
f5fc0b1
display plot from elephant.signal_processing.hilbert¶
7a43010
fix doctest spade.py
ed82100
update spade doctests
348adf6
doctest fix fast_fca.py
3bf5ad7
fix doctest spectral.py
2e475d9
fix doctest spike_train_correlation.py
31e71cf
doctest for spike_train_correlation.py
7adfc58
doctest for spike_train_surrogates.py
91a7538
fixed doctests in spike_train_synchrony.py
4990b18
fixed doctests in statistics.py
c3ee964
doctest for spike_train_synchrony.py
f1eaa71
fixed doctests in sta.py
fb3beec
display figure in elephant.sta.spike_field_coherence
3bb3e16
fix doctests statistics.py
157c43c
changes in test_sta.py
17ad0dd
fixed doctests in unitary_event_analysis.py
896db4a
fix doctests unitary_event_analysis.py
90e1cd8
signal_processing.py old results
83cdf2c
fix pep8 in spade.py
ab621d7
add doctest runner
80de439
add mpi4py to doctest runner
55709b5
change installation order
8671d61
install openmpi library
b9eefef
@Moritz-Alexander-Kern Moritz-Alexander-Kern mentioned this pull request Jul 20, 2022
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@Moritz-Alexander-Kern Moritz-Alexander-Kern mentioned this pull request Aug 1, 2022
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coveralls commented Aug 9, 2022 •
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Coverage Status

Coverage: 87.8% (+0.3%) from 87.457% when pulling 79008a8 on INM-6:enh/doctest_runner into b6f8440 on NeuralEnsemble:master.

@Moritz-Alexander-Kern Moritz-Alexander-Kern added the documentation Indicates a need for improvements or additions to documentation label Nov 4, 2022
@Moritz-Alexander-Kern Moritz-Alexander-Kern added this to the v0.12.0 milestone Feb 16, 2023
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Moritz-Alexander-Kern commented Feb 16, 2023
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build wheels

@Moritz-Alexander-Kern Moritz-Alexander-Kern merged commit 06e0cd1 into NeuralEnsemble:master Feb 16, 2023
@Moritz-Alexander-Kern Moritz-Alexander-Kern deleted the enh/doctest_runner branch July 21, 2023 12:33
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@kohlerca kohlerca Awaiting requested review from kohlerca

@mdenker mdenker Awaiting requested review from mdenker

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