Code

ESM2 Tutorial Updates#426

Code

Merged

farhadrgh merged 39 commits intomainNVIDIA/bionemo-framework:mainfrom farhadr/infer_docsNVIDIA/bionemo-framework:farhadr/infer_docsCopy head branch name to clipboardNov 22, 2024

+1,784-160

Commits

Commits on Nov 1, 2024

• move scripts

  farhadrgh

  committed
  50551ef

  Copy full SHA for 50551ef

Commits on Nov 6, 2024

• Merge branch 'main' into farhadr/refactor

  farhadrgh

  committed
  a4ff843

  Copy full SHA for a4ff843

• resolve conflicts

  farhadrgh

  committed
  08ca0f9

  Copy full SHA for 08ca0f9

• move test file

  farhadrgh

  committed
  2eaf9af

  Copy full SHA for 2eaf9af

Commits on Nov 7, 2024

• undo mv

  farhadrgh

  committed
  dfcbb37

  Copy full SHA for dfcbb37

• reformat into package

  farhadrgh

  committed
  557b62e

  Copy full SHA for 557b62e

• Merge branch 'main' into farhadr/refactor

  farhadrgh

  committed
  cb3116c

  Copy full SHA for cb3116c

• update docs

  farhadrgh

  committed
  306ee68

  Copy full SHA for 306ee68

• Merge branch 'main' into farhadr/refactor

  farhadrgh

  authored
  30695ba

  Copy full SHA for 30695ba

Commits on Nov 8, 2024

• Merge branch 'main' into farhadr/refactor

  farhadrgh

  authored
  72cb566

  Copy full SHA for 72cb566

• resolve conflicts

  farhadrgh

  committed
  4bfae90

  Copy full SHA for 4bfae90

• Merge branch 'farhadr/refactor' of https://github.com/NVIDIA/bionemo-framework into farhadr/refactor

  farhadrgh

  committed
  abb7b17

  Copy full SHA for abb7b17

Commits on Nov 12, 2024

• add new infer api

  farhadrgh

  committed
  f869901

  Copy full SHA for f869901

Commits on Nov 13, 2024

• Merge branch 'main' into farhadr/infer_docs

  farhadrgh

  committed
  d594ab1

  Copy full SHA for d594ab1

Commits on Nov 15, 2024

• update

  farhadrgh

  committed
  a6ca8f5

  Copy full SHA for a6ca8f5

• return mask

  farhadrgh

  committed
  696a2b9

  Copy full SHA for 696a2b9

• Merge branch 'main' into farhadr/infer_docs

  farhadrgh

  committed
  b7c649b

  Copy full SHA for b7c649b

• include input_ids

  farhadrgh

  committed
  ad25171

  Copy full SHA for ad25171

• AAlpha NoteBook

  farhadrgh

  committed
  84545d3

  Copy full SHA for 84545d3

Commits on Nov 18, 2024

• check token_ids

  farhadrgh

  committed
  01c3201

  Copy full SHA for 01c3201

• Merge branch 'main' into farhadr/infer_docs

  farhadrgh

  authored
  8146dae

  Copy full SHA for 8146dae

• fix tag

  farhadrgh

  committed
  071776b

  Copy full SHA for 071776b

Commits on Nov 19, 2024

• alow partial batches

  farhadrgh

  committed
  16080cd

  Copy full SHA for 16080cd

• Merge branch 'main' into farhadr/infer_docs

  farhadrgh

  authored
  91fbd5e

  Copy full SHA for 91fbd5e

• alow partial batches

  farhadrgh

  committed
  05c23b6

  Copy full SHA for 05c23b6

• Merge branch 'farhadr/infer_docs' of https://github.com/NVIDIA/bionemo-framework into farhadr/infer_docs

  farhadrgh

  committed
  fc35c75

  Copy full SHA for fc35c75

Commits on Nov 20, 2024

• add link to brevdev lunchable

  farhadrgh

  committed
  73e5e75

  Copy full SHA for 73e5e75

• add inference notebook

  farhadrgh

  committed
  eb8ba90

  Copy full SHA for eb8ba90

• add launchable link

  farhadrgh

  committed
  0c2151f

  Copy full SHA for 0c2151f

Commits on Nov 21, 2024

• update Note block

  farhadrgh

  committed
  cf99920

  Copy full SHA for cf99920

• update

  farhadrgh

  committed
  e5658f0

  Copy full SHA for e5658f0

• Merge branch 'main' into farhadr/infer_docs

  farhadrgh

  authored
  02b0261

  Copy full SHA for 02b0261

• Update docs/docs/user-guide/examples/bionemo-esm2/finetune.md

  Show description for 3e906ee
  

  farhadrgh

  and

  pstjohn

  authored
  3e906ee

  Copy full SHA for 3e906ee

• add include_input_ids option

  farhadrgh

  committed
  7900708

  Copy full SHA for 7900708

• Merge branch 'farhadr/infer_docs' of https://github.com/NVIDIA/bionemo-framework into farhadr/infer_docs

  farhadrgh

  committed
  a76d1ce

  Copy full SHA for a76d1ce

• add include_input_ids

  farhadrgh

  committed
  9d89373

  Copy full SHA for 9d89373

• add include_input_ids

  farhadrgh

  committed
  d5b1d59

  Copy full SHA for d5b1d59

• undo bump

  farhadrgh

  committed
  9d5b650

  Copy full SHA for 9d5b650

Commits on Nov 22, 2024

• fix nbval failure

  farhadrgh

  committed
  2510eab

  Copy full SHA for 2510eab