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Added the overloaded interface set_initialized() to the MOM_restart module, to record that fields have been initialized, despite not appearing in a restart file. This will allow for a second call to set_initialized() after a call to query_initialized() to replicate the existing behavior of query_initialized() after MOM6 PR #149 (#149) has been accepted. All answers are bitwise identical, but there is a new public interface.
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