Add a condition to include or exclude the processing of nitrate depending on the model's output

[zhanglikate]

1. Add a condition to include or exclude the processing of nitrate depending on the model's output
2. Add XML control files and TXT files for UFS-Aerosols model output.

[zhanglikate]

May I know how to revert it? Thanks. Kate

…

On Aug 31, 2023, at 12:59 PM, WenMeng-NOAA ***@***.***> wrote: @WenMeng-NOAA commented on this pull request. In parm/postcntrl_gefs_aerosol.xml <#768 (comment)>: > @@ -10,64 +10,997 @@ <sigreftime>fcst</sigreftime> <prod_status>oper</prod_status> <data_type>fcst</data_type> - <gen_proc_type>fcst</gen_proc_type> + <gen_proc_type>ens_fcst</gen_proc_type> @zhanglikate <https://github.com/zhanglikate> The "ens_fcst" is not an official type of generating process at https://www.nco.ncep.noaa.gov/pmb/docs/grib2/grib2_doc/grib2_table4-3.shtml <https://www.nco.ncep.noaa.gov/pmb/docs/grib2/grib2_doc/grib2_table4-3.shtml> Please revert it. — Reply to this email directly, view it on GitHub <#768 (review)>, or unsubscribe <https://github.com/notifications/unsubscribe-auth/APJPDRGSYZQVF6LGIIG6SKDXYDNHRANCNFSM6AAAAAA4GOXQPI>. You are receiving this because you were mentioned.

[WenMeng-NOAA]

@zhanglikate You may add new aerosol fields in the files postcntrl_gefs_aerosol*. I am meaning:
in postcntrl_gefs_aerosol.xml:
Change
<gen_proc_type>ens_fcst</gen_proc_type>
into
<gen_proc_type>fcst</gen_proc_type>

change
     <gen_proc>gefs</gen_proc>
 into 
      <gen_proc>gfs_avn</gen_proc>

And the same changes for postcntrl_gefs_aerosol_f00.xml

[zhanglikate]

I just updated and committed. Can you check?

…

On Aug 31, 2023, at 1:21 PM, WenMeng-NOAA ***@***.***> wrote: @zhanglikate <https://github.com/zhanglikate> You may add new aerosol fields in the files postcntrl_gefs_aerosol*. I am meaning: in postcntrl_gefs_aerosol.xml: Change <gen_proc_type>ens_fcst</gen_proc_type> into <gen_proc_type>fcst</gen_proc_type> change <gen_proc>gefs</gen_proc> into <gen_proc>gfs_avn</gen_proc> And the same changes for postcntrl_gefs_aerosol_f00.xml — Reply to this email directly, view it on GitHub <#768 (comment)>, or unsubscribe <https://github.com/notifications/unsubscribe-auth/APJPDRHNEGUPLMBDUSRIVHDXYDP4ZANCNFSM6AAAAAA4GOXQPI>. You are receiving this because you were mentioned.

[zhanglikate]

Corrected.

…

On Aug 31, 2023, at 1:27 PM, WenMeng-NOAA ***@***.***> wrote: @WenMeng-NOAA commented on this pull request. In parm/postcntrl_gefs_aerosol_f00.xml <#768 (comment)>: > +<?xml version="1.0" encoding="UTF-8"?> +<postxml xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="EMC_POST_CTRL_Schema.xsd"> +<!-- Lin Gan: 20160315 validated --> + <paramset> + <datset>GFSPRS</datset> + <grid_num>0</grid_num> + <sub_center>ncep_nco</sub_center> + <version_no>v2003</version_no> + <local_table_vers_no>local_tab_yes1</local_table_vers_no> + <sigreftime>fcst</sigreftime> + <prod_status>oper</prod_status> + <data_type>fcst</data_type> + <gen_proc_type>fcst</gen_proc_type> + <time_range_unit>hour</time_range_unit> + <orig_center>nws_ncep</orig_center> + <gen_proc>gfs</gen_proc> @zhanglikate <https://github.com/zhanglikate> Please change "gfs" into "gfs_avn". — Reply to this email directly, view it on GitHub <#768 (review)>, or unsubscribe <https://github.com/notifications/unsubscribe-auth/APJPDRBVV3FETXXSR63M2V3XYDQQ5ANCNFSM6AAAAAA4GOXQPI>. You are receiving this because you were mentioned.

[WenMeng-NOAA]

@zhanglikate and @lipan-NOAA Do you have UFS model output for the UPP standalone test? The files either on WCOSS2 or Hera would work for me.

[zhanglikate]

@zhanglikate and @lipan-NOAA Do you have UFS model output for the UPP standalone test? The files either on WCOSS2 or Hera would work for me.

@WenMeng-NOAA This the model results at HERA: /scratch1/BMC/gsd-fv3-dev/lzhang/AODtest/case2

[WenMeng-NOAA]

@zhanglikate To generate GEFSV13 aerosol products in UPP, which option should I use in my test, gccpp_on, nasa_on, rdaod?

[zhanglikate]

nasa_on. Thanks

…

On Sep 1, 2023, at 11:07 AM, WenMeng-NOAA ***@***.***> wrote: @zhanglikate <https://github.com/zhanglikate> To generate GEFSV13 aerosol products in UPP, which option should I use in my test, gccpp_on, nasa_on, rdaod? — Reply to this email directly, view it on GitHub <#768 (comment)>, or unsubscribe <https://github.com/notifications/unsubscribe-auth/APJPDRFJL6J3URM7W64XXXDXYII6TANCNFSM6AAAAAA4GOXQPI>. You are receiving this because you were mentioned.

[lipan-NOAA]

example file => HPSS: /NCEPDEV/emc-naqfc/1year/Li.Pan/tmp/forkate-atmnc-upptest-20180808.htar & forkate-sfcnc-upptest-20180808.htar

[WenMeng-NOAA]

@zhanglikate You may add the following changes in parm/postcntrl_gefs_aerosol.xml and parm/postcntrl_gefs_aerosol_f00.xml to label ensemble products:

change
    <gen_proc_type>fcst</gen_proc_type>
into
   <gen_proc_type>ens_fcst</gen_proc_type>
change
    <gen_proc>gfs_avn</gen_proc>
into
   <gen_proc>gefs</gen_proc>
    

After update, the relevant txt files need to regenerated.

[zhanglikate]

ens_fcst

@WenMeng-NOAA Finished. Can you check? Thanks.

[WenMeng-NOAA]

ens_fcst

@WenMeng-NOAA Finished. Can you check? Thanks.

@zhanglikate Your PR look good for me. I will run testing now. Thanks!

[WenMeng-NOAA]

@zhanglikate and @lipan-NOAA Do you know if the file parm/AEROSOL_LUTS.dat is used for processing UFS based aerosol data? If not, can we delete it?

[zhanglikate]

These are for GEFS-Aerosols, better to keep them. Thanks. Kate

…

On Fri, Sep 8, 2023 at 8:06 AM WenMeng-NOAA ***@***.***> wrote: @zhanglikate <https://github.com/zhanglikate> and @lipan-NOAA <https://github.com/lipan-NOAA> Do you know if the file parm/AEROSOL_LUTS.dat is used for processing UFS based aerosol data? If not, can we delete it? — Reply to this email directly, view it on GitHub <#768 (comment)>, or unsubscribe <https://github.com/notifications/unsubscribe-auth/APJPDRGPGGRW7AKPWP2XOG3XZMQ5DANCNFSM6AAAAAA4GOXQPI> . You are receiving this because you were mentioned.Message ID: ***@***.***>

[WenMeng-NOAA]

@zhanglikate My test is at /scratch1/NCEPDEV/stmp2/Wen.Meng/post_gefs_2018080800 on Hera. Please let me know if you see any discrepancies with your test.

[lipan-NOAA]

I tested it on WCOSS2, it looks fine for me

[WenMeng-NOAA]

I tested it on WCOSS2, it looks fine for me

@lipan-NOAA Can you provide me the model output files in netcdf from your test on WCOSS2?

[WenMeng-NOAA]

@FernandoAndrade-NOAA You may start the UPP RT on Hera and Orion. There should be updates in job scripts of gefs testing with aerosol fix file relocation. You may pick up my changes from

Hera: /scratch2/NCEPDEV/ovp/Wen.Meng/ncep_post/post_regression_test_new/jobs
         run_post_fv3gefs_HERA.sh and run_post_fv3gefs_pe_test_HERA.sh

Orion: /home/wmeng/ovp/ncep_post/post_regression_test_new/jobs
         run_post_fv3gefs_ORION.sh and run_post_fv3gefs_pe_test_ORION.sh

[WenMeng-NOAA]

The UPP RT was completed on WCOSS2 without changed results.

[FernandoAndrade-NOAA]

@FernandoAndrade-NOAA You may start the UPP RT on Hera and Orion. There should be updates in job scripts of gefs testing with aerosol fix file relocation. You may pick up my changes from

Hera: /scratch2/NCEPDEV/ovp/Wen.Meng/ncep_post/post_regression_test_new/jobs
         run_post_fv3gefs_HERA.sh and run_post_fv3gefs_pe_test_HERA.sh

Orion: /home/wmeng/ovp/ncep_post/post_regression_test_new/jobs
         run_post_fv3gefs_ORION.sh and run_post_fv3gefs_pe_test_ORION.sh

Apologies for the delay, I have RTs running on Hera and Orion. They've been temperamental today and dropping connection / freezing a lot from my side. I'll post results when they finish.

[FernandoAndrade-NOAA]

UPP RTs have completed successfully on Hera and Orion with no changes to results.

[WenMeng-NOAA]

This PR is ready for merging.