fix(file): Update associated entities.

- Adds missing fields. - Updates annotations link to that entity. Closes #531
NCI-GDC · Mar 17, 2015 · 3acb792 · 3acb792
1 parent bebb9db
commit 3acb792
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Showing 3 changed files with 21 additions and 12 deletions.
diff --git a/app/scripts/files/files.controllers.ts b/app/scripts/files/files.controllers.ts
@@ -40,10 +40,15 @@ module ngApp.files.controllers {
         this.archiveCount = 0;
       }
 
-      this.annotationIds = _.map(file.annotations, (annotation) => {
-        return annotation.annotation_id;
-      });
+      _.every(file.associated_entities, (entity) => {
+        entity.annotations = _.find(file.annotations, (annotation) => {
+          return annotation.annotation_id === entity.entity_id;
+        });
 
+        if (entity.annotations) {
+          entity.annotations = _.pluck(entity.annotations, "annotation_id");
+        }
+      });
     }
 
     isInCart(): boolean {

diff --git a/app/scripts/files/module.ts b/app/scripts/files/module.ts
@@ -36,6 +36,9 @@ module ngApp.files {
               "related_files.type",
               "related_files.file_name",
               "related_files.md5sum",
+              "associated_entities.entity_id",
+              "associated_entities.entity_type",
+              "associated_entities.participant_id",
               "annotations.annotation_id",
               "tags",
               "origin"

diff --git a/app/scripts/files/templates/file.html b/app/scripts/files/templates/file.html
@@ -143,7 +143,7 @@ <h3 class="panel-title">Associated Participants / Biospecimen</h3>
         <div class="panel-body" data-ng-if="!fc.file.participants.length">
           <h4 class="list-group-item-heading">No participants found.</h4>
         </div>
-        <div class="table-responsive" data-ng-if="fc.file.participants.length">
+        <div class="table-responsive" data-ng-if="fc.file.associated_entities.length">
           <table id="participants-table" class="table table-striped table-hover table-condensed table-bordered">
             <thead>
             <tr>
@@ -154,20 +154,21 @@ <h4 class="list-group-item-heading">No participants found.</h4>
             </tr>
             </thead>
             <tbody>
-            <tr data-ng-repeat="p in fc.file.participants track by p.participant_id">
-              <td>tbd</td>
-              <td>tbd</td>
+            <tr data-ng-repeat="e in fc.file.associated_entities track by e.participant_id">
+              <td>{{ ::e.entity_id }}</td>
+              <td>{{ ::e.entity_type | humanify }}</td>
               <td>
-                <a data-ui-sref="participant({ participantId : p.participant_id })">
-                  {{ ::p.participant_id }}
+                <a data-ui-sref="participant({ participantId : e.participant_id })">
+                  {{ ::e.participant_id }}
                 </a>
               </td>
               <td>
                 <a data-ui-sref="annotations({ 'filters':
-                     {{ [{name: 'annotation_id', value: fc.annotationIds }] | makeFilter }} })"
-                   data-ng-if="fc.file.annotations">
-                  {{ fc.file.annotations.length }}
+                     {{ [{name: 'annotation_id', value: e.annotations }] | makeFilter }} })"
+                   data-ng-if="e.annotations.length">
+                  {{ e.annotations.length }}
                 </a>
+                <span data-ng-if="!e.annotations.length">0</span>
               </td>
             </tr>
             </tbody>