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update github tests to use -fallow-argument-mismatch #1946

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merged 26 commits into from
Dec 9, 2022
Merged

update github tests to use -fallow-argument-mismatch #1946

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95553d7
update github tests to use -fallow-argument-mismatch
jedwards4b Dec 7, 2022
2fafb15
update software versions
jedwards4b Dec 7, 2022
9a63af6
update run-name
jedwards4b Dec 7, 2022
dee848b
update checkout and cache actions
jedwards4b Dec 7, 2022
0e91b5e
remove name use run_name
jedwards4b Dec 7, 2022
ce5faf9
try removing name and adding run_name
jedwards4b Dec 7, 2022
a2a7a11
change FCFLAGS to FFLAGS
jedwards4b Dec 7, 2022
8abc70d
fix yaml formatting issues
jedwards4b Dec 7, 2022
0eac1eb
try run-name here
jedwards4b Dec 7, 2022
5a4d06c
more github action fixes
jedwards4b Dec 7, 2022
877f691
try this
jedwards4b Dec 7, 2022
9a9db15
try this
jedwards4b Dec 7, 2022
647e68c
try this
jedwards4b Dec 7, 2022
6f5d6b3
need both FFLAGS and FCFLAGS?
jedwards4b Dec 7, 2022
87e0e94
netcdf integration currently only works with netcdf-c 4.7.4
jedwards4b Dec 7, 2022
acc4626
more github mods
jedwards4b Dec 7, 2022
53c6eec
more github action tuning
jedwards4b Dec 7, 2022
74203a4
oops wrong hdf5 version
jedwards4b Dec 7, 2022
b7745d6
update address sanitizer runs
jedwards4b Dec 7, 2022
830f226
remove memory violating comment
jedwards4b Dec 8, 2022
20a2232
add -static-libasan
jedwards4b Dec 8, 2022
79df169
try fflags instead
jedwards4b Dec 8, 2022
d1138cb
try ldflags
jedwards4b Dec 8, 2022
2f95d78
fix ldflags
jedwards4b Dec 8, 2022
490565b
once more
jedwards4b Dec 8, 2022
c73a4d6
remove redundant test
jedwards4b Dec 9, 2022
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1 change: 1 addition & 0 deletions .github/workflows/autotools.yml
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Original file line number Diff line number Diff line change
Expand Up @@ -17,6 +17,7 @@ jobs:
CPPFLAGS: "-I/usr/include -I/usr/local/include -I/home/runner/pnetcdf/include"
LDFLAGS: "-L/home/runner/pnetcdf/lib"
PNETCDF_VERSION: 1.12.3
FCFLAGS: "-fallow-argument-mismatch"
steps:
- uses: actions/checkout@v2
- name: Installs
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1 change: 1 addition & 0 deletions .github/workflows/cmake.yml
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Expand Up @@ -18,6 +18,7 @@ jobs:
LDFLAGS: "-L/home/runner/pnetcdf/lib"
LD_LIBRARY_PATH: "/home/runner/pnetcdf/lib"
PNETCDF_VERSION: 1.12.3
FCFLAGS: "-fallow-argument-mismatch"
steps:
- uses: actions/checkout@v2
- name: Installs
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1 change: 1 addition & 0 deletions .github/workflows/cmake_ncint.yml
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Expand Up @@ -21,6 +21,7 @@ jobs:
LDFLAGS: "-L/home/runner/pnetcdf/lib"
LD_LIBRARY_PATH: "/home/runner/pnetcdf/lib"
PNETCDF_VERSION: 1.12.3
FCFLAGS: "-fallow-argument-mismatch"
steps:
- uses: actions/checkout@v2
- name: Installs
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3 changes: 2 additions & 1 deletion ...0.7_pnetcdf-12.1_ncint_mpich-3.3_asan.yml → ..._netcdf_hdf5_pnetcdf_ncint_mpich_asan.yml
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Expand Up @@ -19,7 +19,8 @@ jobs:
PNETCDF_VERSION: 1.12.3
HDF5_VERSION: 1.10.7
MPICH_VERSION: 3.3.2
steps:
FCFLAGS: "-fallow-argument-mismatch"
steps:
- uses: actions/checkout@v2
- name: Installs
run: |
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159 changes: 0 additions & 159 deletions .github/workflows/netcdf-4.7.4_hdf5-1.10.7_pnetcdf-12.1_ncint_mpich-3.3_asan.yml
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155 changes: 0 additions & 155 deletions .github/workflows/netcdf-4.7.4_pnetcdf-12.1_ncint_openmpi_4.0.4.yml
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3 changes: 2 additions & 1 deletion ...df5-1.12.0_no_pnetcdf_ncint_mpich-3.3.yml → ...ws/netcdf_hdf5_no_pnetcdf_ncint_mpich.yml
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Expand Up @@ -18,7 +18,8 @@ jobs:
NETCDF_F_VERSION: 4.5.4
MPICH_VERSION: 3.3.2
HDF5_VERSION: 1.12.0
steps:
FCFLAGS: "-fallow-argument-mismatch"
steps:
- uses: actions/checkout@v2
- name: Installs
run: |
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15 changes: 8 additions & 7 deletions ...2.0_pnetcdf-12.2_ncint_mpich-3.3_asan.yml → .../netcdf_hdf5_pnetcdf_ncint_mpich_asan.yml
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Original file line number Diff line number Diff line change
@@ -1,5 +1,5 @@
name: netcdf-4.7.4_hdf5-1.12.0_pnetcdf-12.2_ncint_mpich-3.3_asan

name: netcdf-${{ NETCDF_C_VERSION}}_hdf5-${{ HDF5_VERSION }}_pnetcdf-${{ PNETCDF_VERSION }}_ncint_mpich-${{ MPICH_VERSION}}_asan
run-name: netcdf-${{ NETCDF_C_VERSION}}_hdf5-${{ HDF5_VERSION }}_pnetcdf-${{ PNETCDF_VERSION }}_ncint_mpich-${{ MPICH_VERSION}}_asan
on:
push:
branches: [ master ]
Expand All @@ -14,11 +14,12 @@ jobs:
env:
CPPFLAGS: "-I/home/runner/mpich/include -I/home/runner/hdf5/include -I/home/runner/netcdf-c/include -I/home/runner/netcdf-fortran/include -I/home/runner/pnetcdf/include"
LDFLAGS: "-L/home/runner/mpich/lib -L/home/runner/hdf5/lib -L/home/runner/netcdf-c/lib -L/home/runner/netcdf-fortran/lib -L/home/runner/pnetcdf/lib"
NETCDF_C_VERSION: 4.7.4
NETCDF_F_VERSION: 4.5.4
NETCDF_C_VERSION: 4.9.0
NETCDF_F_VERSION: 4.6.0
PNETCDF_VERSION: 1.12.3
MPICH_VERSION: 3.3.2
HDF5_VERSION: 1.12.0
MPICH_VERSION: 4.0.3
HDF5_VERSION: 1.12.3
FCFLAGS: "-fallow-argument-mismatch"
steps:
- uses: actions/checkout@v2
- name: Installs
Expand Down Expand Up @@ -145,7 +146,7 @@ jobs:
export CC=/home/runner/mpich/bin/mpicc
export FC=/home/runner/mpich/bin/mpifort
export CFLAGS="-g -O0 -fsanitize=address -fno-omit-frame-pointer"
export FCFLAGS="-g -O0 -fsanitize=address -fno-omit-frame-pointer"
export FCFLAGS="$FCFLAGS -g -O0 -fsanitize=address -fno-omit-frame-pointer"
autoreconf -i
./configure --enable-fortran --enable-netcdf-integration
make -j check
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