add file exist check for adaptation sql. Remove 3 adapt templates. Up…

…date README

README.md

@@ -180,6 +180,60 @@ Start `test.sh` script by running:
 
 This will produce jacoco reports with code coverage measurements.
 
+## Adaptation Setup Guide
+
+CWS can be adapted and tailored for a mission. This can be done by modifying certain resources and source code of CWS-CORE.
+
+Create new functionalities by adding:
+
+* External Database Config
+* Custom Java code
+* Custom Rest Service API
+* Custom Initiators
+* etc...
+
+### Adaptation Database
+
+Adaptation Database feature lets you connect to a external database separate from that of the main `cws_dev` database.
+
+**(1)** You must first include the following SQL Template files to the `install/sql/` directory:
+* `install/sql/adaptation.sql.template`          **(Core Database: `cws_dev`)**
+* `install/sql/adaptation_core.sql.template`     **(Core Database: `cws_dev`)**
+* `install/sql/adaptation_external.sql.template` **(Adaptation Database: `cws_external_db`)**
+
+**(2)** Create your schema/tables within the added Adaptation SQL Template files.
+* Example (`adaptation_external.sql.template`):
+```
+CREATE TABLE IF NOT EXISTS `cws_external_table` (
+    ...
+    ...
+) ENGINE=InnoDB DEFAULT CHARSET=utf8 COLLATE=utf8_bin;
+```
+
+**(3)** Write Custom Java Code.
+
+By referencing your adaptation tables, you can connect and communicate with your external database.
+
+Write Java custom code that extends from DbService and use the `jdbcTemplate` or `jdbcAdaptationTemplate` JDBC source to query the core and external databases.
+```
+jdbcAdaptationTemplate  (adaptation external database)
+jdbcTemplate            (core database)
+```
+
+### Adaptation Workers Modal 
+
+Custom your Deployment page Workers view with add-ons and filters.
+
+The UI for the Worker listview is customizable with through the javascript `addAdaptationWorkersInfo` function.
+
+File: `cws-ui/src/main/webapp/js/adaptation-workers-modal.js`
+
+Write your custom code here:
+```
+function addAdaptationWorkersInfo(dataProcKey, listWorkers) {
+	return; 
+}
+```
 # Contributing
 
 Please see our [contribution guidelines](https://github.com/NASA-AMMOS/common-workflow-service/blob/main/CONTRIBUTING.md).

create_server_dist.sh

@@ -186,9 +186,17 @@ awk 'NR==FNR { a[n++]=$0; next }
 /__CUSTOM_METHODS_JAVA__/ { for (i=0;i<n;++i) print a[i]; next }1' ${DIST}/snippets.java ${INSTALL_DIR}/sql/core.sql.template > ${CWS}/sql/cws/core.sql
 
 cp ${INSTALL_DIR}/sql/core.afterstartup.sql.template           ${CWS}/sql/cws/core.afterstartup.sql
-cp ${INSTALL_DIR}/sql/adaptation.sql.template                  ${CWS}/sql/cws/adaptation.sql
-cp ${INSTALL_DIR}/sql/adaptation_core.sql.template             ${CWS}/sql/cws/adaptation_core.sql
-cp ${INSTALL_DIR}/sql/adaptation_external.sql.template         ${CWS}/sql/cws/adaptation_external.sql
+
+if [[ -f ${INSTALL_DIR}/sql/adaptation.sql.template && -f ${INSTALL_DIR}/sql/adaptation_core.sql.template && -f ${INSTALL_DIR}/sql/adaptation_external.sql.template ]]; then
+    print "Building adaptation (external) sql..."
+    awk 'NR==FNR { a[n++]=$0; next }
+    /__CUSTOM_METHODS_JAVA__/ { for (i=0;i<n;++i) print a[i]; next }1' ${DIST}/snippets.java ${INSTALL_DIR}/sql/adaptation.sql.template > ${CWS}/sql/cws/adaptation.sql
+    awk 'NR==FNR { a[n++]=$0; next }
+    /__CUSTOM_METHODS_JAVA__/ { for (i=0;i<n;++i) print a[i]; next }1' ${DIST}/snippets.java ${INSTALL_DIR}/sql/adaptation_core.sql.template > ${CWS}/sql/cws/adaptation_core.sql
+    awk 'NR==FNR { a[n++]=$0; next }
+    /__CUSTOM_METHODS_JAVA__/ { for (i=0;i<n;++i) print a[i]; next }1' ${DIST}/snippets.java ${INSTALL_DIR}/sql/adaptation_external.sql.template > ${CWS}/sql/cws/adaptation_external.sql
+fi
+
 
 rm ${DIST}/snippets.java
 rm ${DIST}/snippets.java.bak

cws-installer/src/main/java/jpl/cws/task/CwsInstaller.java

@@ -1693,9 +1693,9 @@ private static void showInstallationInfo() {
 				print("    Database Driver               = " + cws_adapt_db_driver);
 				print("    Database User                 = " + cws_adapt_db_username);
 				print("    Database Password             = ****** (hidden) ");
+				print("....................................................................................");
 			}
 		}
-		print("....................................................................................");
 
 		if (cws_auth_scheme.equals("LDAP")) {
 			print("LDAP User                     = " + cws_user);
@@ -1708,6 +1708,7 @@ private static void showInstallationInfo() {
 			print("Admin Last Name               = " + cws_user_lastname);
 			print("Admin Email                   = " + cws_user_email);
 		}
+		print("....................................................................................");
 		print("CWS web port                  = " + cws_tomcat_connector_port);
 		print("CWS SSL port                  = " + cws_tomcat_ssl_port);
 		print("CWS AJP port                  = " + cws_tomcat_ajp_port);
@@ -2598,6 +2599,7 @@ private static void updateFiles() throws IOException {
 			String serverAdaptationContent = getFileContents(
 				Paths.get(config_work_dir + SEP + "tomcat_conf" + SEP + "server_adaptation.xml"));
 			content = content.replace("<Resource name=\"jdbc/cws\"", serverAdaptationContent);
+			content = content.replace("__ADAPTATION_SERVER_RESOURCE__", "");
 
 			content = content.replace("__CWS_ADAPT_DB_URL__",          cws_adapt_db_url);
 			content = content.replace("__CWS_ADAPT_DB_DRIVER__",       cws_adapt_db_driver);
@@ -3334,4 +3336,4 @@ private static void setPreset(String key, String value) {
 		}
 	}
 
-}
+}