Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

fix priorCoVariance issue in PDO.m and change fimTotal to fimOrig #13

Open
wants to merge 2 commits into
base: main
Choose a base branch
from

Conversation

alexpopinga
Copy link
Collaborator

Code now runs with equal size arrays for evaluateExperiment function ("diag(fimlog10PriorStd.^2)" did not match size with "ModelGRDusp100nM.dataSet.nCells" so in SSIT.m "prioCoVariance" and therefore "fimTotal{is}" did not match "cellCounts(it)" - same issue as encountered previously). Also had to change "fimTotal" to "fimOrig" when computing determinants for respective FIMs ("fimDetVsNumberMAt").

WARNING: Plot may still be inaccurate (%% STEP XX.E. -- Plot Information vs. Expt Design, PDO, and Number of Cells)

alexpopinga and others added 2 commits September 6, 2024 16:58
Code now runs with equal size arrays for evaluateExperiment function ("diag(fimlog10PriorStd.^2)" did not match size with "ModelGRDusp100nM.dataSet.nCells" so in SSIT.m "prioCoVariance" and therefore "fimTotal{is}" did not match "cellCounts(it)" - same issue as encountered previously).  Also had to change "fimTotal" to "fimOrig" when computing determinants for respective FIMs ("fimDetVsNumberMAt").

WARNING: Plot may still be inaccurate (%% STEP XX.E. -- Plot Information vs. Expt Design, PDO, and Number of Cells)
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

Successfully merging this pull request may close these issues.

2 participants