Code

Refactor readers vi#248

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mschwoer merged 15 commits intodevelopmentMannLabs/alphabase:developmentfrom refactor_readers_VIMannLabs/alphabase:refactor_readers_VICopy head branch name to clipboardJan 9, 2025

+85-75

Commits

Commits on Nov 20, 2024

• refactor mod_seq_column logic

  mschwoer

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  bae93fb

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• add docstrings

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  8f5cb80

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• fix tests

  mschwoer

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• fix identation in MAxQuantReader._load_file

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• separate file loading and preprocessing

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• remove obsolete calls to _get_mod_seq_column

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• remove obsolete calls to _get_mod_seq_column

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• provide default implementation for _load_file

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• make DiannReader a MaxQuantReader

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• Revert "make DiannReader a MaxQuantReader"

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• Revert "provide default implementation for _load_file"

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• Revert "remove obsolete calls to _get_mod_seq_column"

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• Revert "remove obsolete calls to _get_mod_seq_column"

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• Revert "separate file loading and preprocessing"

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  mschwoer

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• fix tests

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