MODFLOW 6 compiler checks #26
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| name: MODFLOW 6 compiler checks | |
| on: | |
| # workflow_dispatch trigger to start release via GitHub UI or CLI, see | |
| # https://docs.github.com/en/actions/managing-workflow-runs/manually-running-a-workflow | |
| workflow_dispatch: | |
| env: | |
| PIXI_BETA_WARNING_OFF: true | |
| jobs: | |
| test: | |
| name: Test | |
| runs-on: ${{ matrix.os }} | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| # combinations from https://github.com/fortran-lang/setup-fortran#runner-compatibility | |
| include: | |
| # gfortran | |
| - {os: ubuntu-20.04, compiler: gcc, version: 11} | |
| - {os: ubuntu-22.04, compiler: gcc, version: 11} | |
| - {os: ubuntu-22.04, compiler: gcc, version: 12} | |
| - {os: ubuntu-22.04, compiler: gcc, version: 13} | |
| - {os: macos-11, compiler: gcc, version: 11} | |
| - {os: macos-11, compiler: gcc, version: 12} | |
| - {os: macos-11, compiler: gcc, version: 13} | |
| - {os: macos-12, compiler: gcc, version: 11} | |
| - {os: macos-12, compiler: gcc, version: 12} | |
| - {os: macos-12, compiler: gcc, version: 13} | |
| - {os: windows-2019, compiler: gcc, version: 11} | |
| - {os: windows-2019, compiler: gcc, version: 12} | |
| - {os: windows-2019, compiler: gcc, version: 13} | |
| - {os: windows-2022, compiler: gcc, version: 11} | |
| - {os: windows-2022, compiler: gcc, version: 12} | |
| - {os: windows-2022, compiler: gcc, version: 13} | |
| # ifx | |
| - {os: ubuntu-20.04, compiler: intel, version: 2024.1} | |
| - {os: ubuntu-20.04, compiler: intel, version: "2024.0"} | |
| - {os: ubuntu-20.04, compiler: intel, version: 2023.2} | |
| - {os: ubuntu-20.04, compiler: intel, version: 2023.1} | |
| - {os: ubuntu-20.04, compiler: intel, version: "2023.0"} | |
| - {os: ubuntu-20.04, compiler: intel, version: 2022.2.1} | |
| - {os: ubuntu-20.04, compiler: intel, version: 2022.2} | |
| - {os: ubuntu-22.04, compiler: intel, version: 2024.1} | |
| - {os: ubuntu-22.04, compiler: intel, version: "2024.0"} | |
| - {os: ubuntu-22.04, compiler: intel, version: 2023.2} | |
| - {os: ubuntu-22.04, compiler: intel, version: 2023.1} | |
| - {os: ubuntu-22.04, compiler: intel, version: "2023.0"} | |
| - {os: ubuntu-22.04, compiler: intel, version: 2022.2.1} | |
| - {os: ubuntu-22.04, compiler: intel, version: 2022.2} | |
| # no ifx on mac | |
| - {os: windows-2019, compiler: intel, version: 2024.1} | |
| - {os: windows-2019, compiler: intel, version: "2024.0"} | |
| - {os: windows-2019, compiler: intel, version: 2023.2} | |
| - {os: windows-2019, compiler: intel, version: 2023.1} | |
| - {os: windows-2019, compiler: intel, version: "2023.0"} | |
| - {os: windows-2019, compiler: intel, version: 2022.2} | |
| - {os: windows-2022, compiler: intel, version: 2024.1} | |
| - {os: windows-2022, compiler: intel, version: "2024.0"} | |
| - {os: windows-2022, compiler: intel, version: 2023.2} | |
| - {os: windows-2022, compiler: intel, version: 2023.1} | |
| - {os: windows-2022, compiler: intel, version: "2023.0"} | |
| - {os: windows-2022, compiler: intel, version: 2022.2} | |
| # ifort | |
| - {os: ubuntu-20.04, compiler: intel-classic, version: "2021.10"} | |
| - {os: ubuntu-20.04, compiler: intel-classic, version: 2021.9} | |
| - {os: ubuntu-20.04, compiler: intel-classic, version: 2021.8} | |
| - {os: ubuntu-20.04, compiler: intel-classic, version: 2021.7} | |
| - {os: ubuntu-20.04, compiler: intel-classic, version: 2021.6} | |
| - {os: ubuntu-20.04, compiler: intel-classic, version: 2021.5} | |
| - {os: ubuntu-20.04, compiler: intel-classic, version: 2021.4} | |
| - {os: ubuntu-20.04, compiler: intel-classic, version: 2021.3} | |
| - {os: ubuntu-20.04, compiler: intel-classic, version: 2021.2} | |
| - {os: ubuntu-20.04, compiler: intel-classic, version: 2021.1} | |
| - {os: ubuntu-22.04, compiler: intel-classic, version: "2021.10"} | |
| - {os: ubuntu-22.04, compiler: intel-classic, version: 2021.9} | |
| - {os: ubuntu-22.04, compiler: intel-classic, version: 2021.8} | |
| - {os: ubuntu-22.04, compiler: intel-classic, version: 2021.7} | |
| - {os: ubuntu-22.04, compiler: intel-classic, version: 2021.6} | |
| - {os: ubuntu-22.04, compiler: intel-classic, version: 2021.5} | |
| - {os: ubuntu-22.04, compiler: intel-classic, version: 2021.4} | |
| - {os: ubuntu-22.04, compiler: intel-classic, version: 2021.3} | |
| - {os: ubuntu-22.04, compiler: intel-classic, version: 2021.2} | |
| - {os: ubuntu-22.04, compiler: intel-classic, version: 2021.1} | |
| - {os: macos-11, compiler: intel-classic, version: "2021.10"} | |
| - {os: macos-11, compiler: intel-classic, version: 2021.9} | |
| - {os: macos-11, compiler: intel-classic, version: 2021.8} | |
| - {os: macos-11, compiler: intel-classic, version: 2021.7} | |
| - {os: macos-11, compiler: intel-classic, version: 2021.6} | |
| - {os: macos-11, compiler: intel-classic, version: 2021.5} | |
| - {os: macos-11, compiler: intel-classic, version: 2021.4} | |
| - {os: macos-11, compiler: intel-classic, version: 2021.3} | |
| - {os: macos-11, compiler: intel-classic, version: 2021.2} | |
| - {os: macos-11, compiler: intel-classic, version: 2021.1} | |
| - {os: macos-12, compiler: intel-classic, version: "2021.10"} | |
| - {os: macos-12, compiler: intel-classic, version: 2021.9} | |
| - {os: macos-12, compiler: intel-classic, version: 2021.8} | |
| - {os: macos-12, compiler: intel-classic, version: 2021.7} | |
| - {os: macos-12, compiler: intel-classic, version: 2021.6} | |
| - {os: macos-12, compiler: intel-classic, version: 2021.5} | |
| - {os: macos-12, compiler: intel-classic, version: 2021.4} | |
| - {os: macos-12, compiler: intel-classic, version: 2021.3} | |
| - {os: macos-12, compiler: intel-classic, version: 2021.2} | |
| - {os: macos-12, compiler: intel-classic, version: 2021.1} | |
| - {os: windows-2019, compiler: intel-classic, version: "2021.10"} | |
| - {os: windows-2019, compiler: intel-classic, version: 2021.9} | |
| - {os: windows-2019, compiler: intel-classic, version: 2021.8} | |
| - {os: windows-2019, compiler: intel-classic, version: 2021.7} | |
| - {os: windows-2019, compiler: intel-classic, version: 2021.6} | |
| - {os: windows-2022, compiler: intel-classic, version: "2021.10"} | |
| - {os: windows-2022, compiler: intel-classic, version: 2021.9} | |
| - {os: windows-2022, compiler: intel-classic, version: 2021.8} | |
| - {os: windows-2022, compiler: intel-classic, version: 2021.7} | |
| - {os: windows-2022, compiler: intel-classic, version: 2021.6} | |
| defaults: | |
| run: | |
| shell: bash | |
| steps: | |
| - name: Checkout modflow6 | |
| uses: actions/checkout@v4 | |
| with: | |
| path: modflow6 | |
| - name: Checkout modflow6-testmodels | |
| uses: actions/checkout@v4 | |
| with: | |
| repository: MODFLOW-USGS/modflow6-testmodels | |
| path: modflow6-testmodels | |
| - name: Checkout modflow6-examples | |
| uses: actions/checkout@v4 | |
| with: | |
| repository: MODFLOW-USGS/modflow6-examples | |
| path: modflow6-examples | |
| - name: Setup ${{ matrix.compiler }} ${{ matrix.version }} | |
| uses: fortran-lang/setup-fortran@v1 | |
| with: | |
| compiler: ${{ matrix.compiler}} | |
| version: ${{ matrix.version }} | |
| - name: Setup pixi | |
| uses: prefix-dev/[email protected] | |
| with: | |
| pixi-version: v0.24.2 | |
| manifest-path: "modflow6/pixi.toml" | |
| - name: Custom pixi install | |
| working-directory: modflow6 | |
| run: pixi run install | |
| - name: Build modflow6 | |
| working-directory: modflow6 | |
| run: | | |
| pixi run setup builddir | |
| pixi run build builddir | |
| - name: Show build log | |
| if: failure() | |
| working-directory: modflow6 | |
| run: cat builddir/meson-logs/meson-log.txt | |
| - name: Upload build log | |
| if: failure() | |
| uses: actions/upload-artifact@v3 | |
| with: | |
| name: meson-log.txt | |
| path: modflow6/builddir/meson-logs/meson-log.txt | |
| - name: Unit test programs | |
| if: success() | |
| working-directory: modflow6 | |
| run: pixi run test builddir | |
| - name: Create compile report | |
| if: success() || failure() | |
| shell: bash | |
| run: | | |
| if [[ "${{ job.status }}" == "success" ]]; then | |
| support="✓" | |
| else | |
| support="" | |
| fi | |
| mkdir -p compat | |
| prefix="${{ matrix.os }},${{ matrix.compiler }},${{ matrix.version }}" | |
| echo "$prefix,$support" >> "compat/comp_${prefix//,/_}.csv" | |
| - name: Update flopy | |
| if: success() | |
| working-directory: modflow6/autotest | |
| run: pixi run update-flopy | |
| - name: Get executables | |
| if: success() | |
| working-directory: modflow6/autotest | |
| env: | |
| GITHUB_TOKEN: ${{ github.token }} | |
| run: pixi run get-exes | |
| - name: Test modflow6 | |
| if: success() | |
| working-directory: modflow6 | |
| env: | |
| REPOS_PATH: ${{ github.workspace }} | |
| run: pixi run autotest | |
| - name: Create test report | |
| if: success() || failure() | |
| shell: bash | |
| run: | | |
| if [[ "${{ job.status }}" == "success" ]]; then | |
| support="✓" | |
| else | |
| support="" | |
| fi | |
| mkdir -p compat | |
| prefix="${{ matrix.os }},${{ matrix.compiler }},${{ matrix.version }}" | |
| echo "$prefix,$support" >> "compat/test_${prefix//,/_}.csv" | |
| - name: Upload reports | |
| if: success() || failure() | |
| uses: actions/upload-artifact@v3 | |
| with: | |
| name: compat | |
| path: compat/*.csv | |
| report: | |
| name: Make compatibility report | |
| if: success() || failure() | |
| needs: test | |
| runs-on: ubuntu-latest | |
| permissions: | |
| contents: write | |
| pull-requests: write | |
| steps: | |
| - name: Checkout repository | |
| uses: actions/checkout@v4 | |
| - name: Setup Python | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: 3.9 | |
| - name: Install packages | |
| run: pip install tabulate pandas | |
| - name: Download reports | |
| uses: actions/download-artifact@v3 | |
| with: | |
| name: compat | |
| path: .github/compat/new | |
| - name: Concatenate reports | |
| working-directory: .github/compat | |
| run: | | |
| cols="runner,compiler,version,support" | |
| echo "$cols" > long_comp.csv | |
| echo "$cols" > long_test.csv | |
| cat new/comp*.csv >> long_comp.csv | |
| cat new/test*.csv >> long_test.csv | |
| - name: Make wide CSV and MD tables | |
| working-directory: .github/compat | |
| id: merge-reports | |
| run: | | |
| python ../common/widen_compat_reports.py "long_comp.csv" "comp.csv" | |
| python ../common/widen_compat_reports.py "long_test.csv" "test.csv" | |
| # only upload wide CSVs and Markdown tables | |
| - name: Upload artifacts | |
| uses: actions/upload-artifact@v3 | |
| with: | |
| name: compat | |
| path: | | |
| .github/compat/comp.* | |
| .github/compat/test.* | |
| # update DEVELOPER.md if this is not a push event and there are any changes | |
| - name: Check for changes | |
| working-directory: .github/compat | |
| if: github.event_name != 'pull_request' | |
| id: diff | |
| run: | | |
| if ! [ -f comp.csv ]; then | |
| echo "diff=false" >> $GITHUB_OUTPUT | |
| exit 0 | |
| fi | |
| diff_comp=$(git diff comp.csv) | |
| diff_test=$(git diff test.csv) | |
| if [[ ( $diff_comp == "" ) && ( $diff_test == "" ) ]]; then | |
| echo "No changes found" | |
| echo "diff=false" >> $GITHUB_OUTPUT | |
| else | |
| echo "comp.csv diff:" | |
| echo "$diff_comp" | |
| echo "test.csv diff:" | |
| echo "$diff_test" | |
| echo "diff=true" >> $GITHUB_OUTPUT | |
| fi | |
| - name: Update DEVELOPER.md | |
| if: ${{ steps.diff.outputs.diff == 'true' && github.event_name != 'pull_request' }} | |
| run: | | |
| python .github/common/update_compat_tables.py "compile" ".github/compat/comp.md" "DEVELOPER.md" | |
| python .github/common/update_compat_tables.py "test" ".github/compat/test.md" "DEVELOPER.md" | |
| - name: Print DEVELOPER.md diff | |
| if: ${{ steps.diff.outputs.diff == 'true' && github.event_name != 'pull_request' }} | |
| run: git diff DEVELOPER.md | |
| - name: Create pull request | |
| if: ${{ steps.diff.outputs.diff == 'true' && github.event_name != 'pull_request' }} | |
| env: | |
| GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }} | |
| run: | | |
| # one at a time | |
| head="compat" | |
| id=$(gh pr list -H $head -s open --json id -q ".[0].id") | |
| [[ -n "${id// /}" ]] && (echo "PR already open"; exit 0) || (echo "opening PR") | |
| # setup bot user | |
| git config user.name "github-actions[bot]" | |
| git config user.email "41898282+github-actions[bot]@users.noreply.github.com" | |
| # create new branch | |
| git switch -c "$head" | |
| # commit and push | |
| git add DEVELOPER.md .github/compat/comp.csv .github/compat/test.csv | |
| git commit -m "Update compatibility tables" | |
| git push -u origin "$head" | |
| # open PR | |
| cat <(echo '### Compile') <(echo) .github/compat/comp.md <(echo) <(echo '### Test') <(echo) .github/compat/test.md > compat.md | |
| gh pr create -B "${{ github.event.repository.default_branch }}" -H "$head" --title "Update compile/test compatibility tables" --body-file compat.md |