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🧬 helanal refactor 🧬#2622

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Merged

fiona-naughton merged 18 commits intoMDAnalysis:developMDAnalysis/mdanalysis:developfrom lilyminium:helanallilyminium/mdanalysis:helanalCopy head branch name to clipboardJul 19, 2020

+1,208-90

Commits

Commits on Jul 6, 2020

• added helanal

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  d7cdac8

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• added docs and universe_from_origin

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  ad04f40

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• updated to use np clip

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• added fixes, tests, new local_screw algorithm

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  5e661ba

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• make linter happy

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  02bccf3

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• deprecated helanal and updated changelog

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  6cd51a4

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• removed secondarystructure method

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• fixes to util

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  5342ed8

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• added new tests

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• updated helanal warnings check

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  ea7245f

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• add fixes

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• moved screw angles to (-pi, pi]

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• changed screw angles to plane of global_axis and vector perpendicular to global_axis and ref_axis

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• changed screw angles to projection onto cross-axis

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  f5da2a9

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• pep8 fixes

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• add link

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Commits on Jul 11, 2020

• Remove double rdf docs

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Commits on Jul 19, 2020

• Merge branch 'develop' into helanal

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