fix empty HPO error.

[hyunhwan-bcm]

The HPO correction in main hadn't applied to nextflow_conversion.

AI_MARRVEL/run/proc.sh

Line 28 in 47df5f6

if [[ -z $(egrep 'HP:[0-9]{7}' /input/hpo.txt) ]] ; then

Now the code for handling the empty/invalid HPO has been added in HPO_SIM, and here is the output from the workdir:

❯ cd ef/e2e89a3bc359568cbd931485ff0096
❯ ls
 70M 22 Aug 15:16  1-cz
2.8M 22 Aug 15:16  1-dx
   - 22 Aug 15:15  demo_empty_HPO.txt -> /Users/hyun-hwanjeong/Downloads/demo_empty_HPO.txt
   - 22 Aug 15:15  genemap2_v2022.rds -> /Volumes/HWAN-T7/data-dependency/omim_annotate/hg19/genemap2_v2022.rds
   - 22 Aug 15:15  HGMD_phen.tsv -> /Volumes/HWAN-T7/data-dependency/omim_annotate/hg19/HGMD_phen.tsv
   - 22 Aug 15:15  hp.obo -> /Volumes/HWAN-T7/data-dependency/omim_annotate/hp.obo
   - 22 Aug 15:15  HPO_OMIM.tsv -> /Volumes/HWAN-T7/data-dependency/omim_annotate/hg19/HPO_OMIM.tsv
❯ cat demo_empty_HPO.txt
HP:0000001