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small fix for notebooks ci #425

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Aug 11, 2023
Merged

small fix for notebooks ci #425

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9779a41
small fix for notebooks ci
ismael-mendoza Aug 11, 2023
81c16c4
gitattributes
ismael-mendoza Aug 11, 2023
bc99ae5
mistake
ismael-mendoza Aug 11, 2023
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6 changes: 6 additions & 0 deletions .github/workflows/notebooks.yml
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Original file line number Diff line number Diff line change
Expand Up @@ -37,6 +37,12 @@ jobs:
run: |
poetry install

- name: Install Scarlet
run: |
pip install "pybind11[global]" peigen
git clone https://github.com/pmelchior/scarlet.git
cd scarlet; python setup.py install; cd ..

# just checks if they run
- name: Run notebooks
run: |
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94 changes: 47 additions & 47 deletions notebooks/00-quickstart.ipynb
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Original file line number Diff line number Diff line change
Expand Up @@ -2,7 +2,7 @@
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Expand Down Expand Up @@ -40,7 +40,7 @@
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Expand All @@ -51,7 +51,7 @@
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Expand Down Expand Up @@ -84,14 +84,14 @@
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Expand All @@ -113,7 +113,7 @@
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Expand All @@ -140,7 +140,7 @@
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Expand All @@ -165,14 +165,14 @@
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Expand All @@ -190,7 +190,7 @@
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Expand All @@ -216,7 +216,7 @@
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Expand All @@ -233,7 +233,7 @@
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Expand Down Expand Up @@ -269,7 +269,7 @@
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Expand Down Expand Up @@ -302,7 +302,7 @@
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Expand All @@ -311,7 +311,7 @@
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Expand All @@ -331,14 +331,14 @@
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Expand All @@ -356,7 +356,7 @@
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Expand All @@ -376,7 +376,7 @@
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Expand All @@ -390,7 +390,7 @@
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Expand All @@ -409,16 +409,16 @@
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Expand Down Expand Up @@ -453,16 +453,16 @@
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Expand Down Expand Up @@ -498,16 +498,16 @@
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Expand Down Expand Up @@ -551,7 +551,7 @@
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Expand All @@ -560,7 +560,7 @@
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Expand All @@ -580,7 +580,7 @@
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Expand All @@ -597,7 +597,7 @@
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Expand All @@ -618,14 +618,14 @@
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Expand All @@ -641,7 +641,7 @@
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Expand All @@ -660,7 +660,7 @@
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Expand All @@ -677,14 +677,14 @@
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Expand All @@ -700,7 +700,7 @@
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Expand All @@ -718,16 +718,16 @@
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Expand Down Expand Up @@ -770,16 +770,16 @@
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Expand Down Expand Up @@ -815,7 +815,7 @@
"# plot isolated images from prediction\n",
"for ii in range(3, 6):\n",
" ax = axes.flatten()[ii]\n",
" ax.imshow(deblend_batch.deblended_images[0, ii-3, 2, clip:-clip, clip:-clip], cmap=\"gray\", \n",
" ax.imshow(deblend_batch.deblended_images[0, ii-3, 0, clip:-clip, clip:-clip], cmap=\"gray\", \n",
" vmin=vmin, vmax=vmax)\n",
"\n",
"# add colorbar\n",
Expand Down