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Merge pull request #5 from mshakya/master
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merging minor changes in README
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mshakya authored Oct 7, 2019
2 parents f0b5f1e + 113504a commit 0db9b86
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8 changes: 3 additions & 5 deletions README.md
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# 0.0.0 DEPENDENCIES
```
PYTHON VERSION >= 3.6
PYTHON VERSION >= 3.6.6
```

### 0.1.1 PYTHON DEPENDENCIES
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conda config --add channels defaults
conda config --add channels bioconda
conda config --add channels conda-forge
conda create --yes -n mash_env python=3.6.6
conda create --yes -n metamer_env python=3.6.6
conda create -n metamer_env
conda install --yes -c bioconda mash=2.1.1 -n metamer_env
conda install --yes -c bioconda faqcs -n metamer_env
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```
cd metamer
metamer luigi.cfg
metamer -c luigi.cfg
```


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metamer also outputs a distance matrix of mash distances (`mash_dist.txt`) in coordinate form and square form (`dist.txt`).

# LICENSE

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