Update files #510
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| name: CI | |
| on: | |
| push: | |
| # The CI is executed on every push on every branch | |
| branches: | |
| - master | |
| - dynamic-mesh-pipeline | |
| pull_request: | |
| # The CI is executed on every pull request to the main branch | |
| branches: | |
| - master | |
| - dynamic-mesh-pipeline | |
| schedule: | |
| # The CI is executed every day at 8am | |
| - cron: "0 8 * * *" | |
| env: | |
| CACHE_NUMBER: 3 # Increase to reset cache | |
| jobs: | |
| check-code: | |
| name: Check code | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: Checkout | |
| uses: actions/checkout@v3 | |
| - name: Upgrade pip and setuptools | |
| run: python3 -m pip install pip setuptools --upgrade | |
| - name: Install types-paramiko | |
| run: python3 -m pip install types-paramiko | |
| - name: Install VaMPy | |
| run: python3 -m pip install .[test] | |
| - name: Check code with Flake8 | |
| run: python3 -m flake8 src | |
| - name: Check tests with Flake8 | |
| run: python3 -m flake8 tests | |
| - name: Check code with mypy | |
| run: python3 -m mypy | |
| test-code: | |
| needs: check-code | |
| strategy: | |
| matrix: | |
| include: | |
| - os: ubuntu-latest | |
| label: linux-64 | |
| prefix: /usr/share/miniconda3/envs/vampy | |
| - os: macos-latest | |
| label: osx-64 | |
| prefix: /Users/runner/miniconda3/envs/vampy | |
| name: Test VaMPy on ${{ matrix.label }} | |
| runs-on: ${{ matrix.os }} | |
| # https://github.com/marketplace/actions/setup-miniconda#use-a-default-shell | |
| defaults: | |
| run: | |
| shell: bash -l {0} | |
| steps: | |
| - name: Checkout | |
| uses: actions/checkout@v3 | |
| - name: Upgrade pip and setuptools | |
| run: | | |
| python3 -m pip install pip setuptools --upgrade | |
| # See: https://github.com/marketplace/actions/setup-miniconda | |
| - name: Setup Mambaforge | |
| uses: conda-incubator/setup-miniconda@v2 | |
| with: | |
| miniforge-variant: Mambaforge | |
| miniforge-version: latest | |
| channels: conda-forge | |
| activate-environment: vampy | |
| use-mamba: true | |
| - name: Set cache date | |
| run: echo "DATE=$(date +'%Y%m%d')" >> $GITHUB_ENV | |
| - uses: actions/cache@v2 | |
| with: | |
| path: ${{ matrix.prefix }} | |
| key: ${{ matrix.label }}-conda-${{ hashFiles('environment.yml') }}-${{ env.DATE }}-${{ env.CACHE_NUMBER }} | |
| id: cache | |
| - name: Update environment | |
| run: mamba env update -n vampy -f environment.yml | |
| if: steps.cache.outputs.cache-hit != 'true' | |
| - name: Install VaMPy | |
| run: python3 -m pip install .[test] | |
| - name: Run tests | |
| run: python3 -m pytest tests | |
| - name: Upload coverage report to codecov | |
| if: matrix.os == 'ubuntu-latest' | |
| uses: codecov/codecov-action@v3 | |
| with: | |
| token: ${{ secrets.CODECOV_TOKEN }} | |
| files: ./coverage.xml | |
| fail_ci_if_error: false | |
| verbose: true |