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removed TaijaPLotting
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@pat-alt
pat-alt committed Jul 23, 2024
1 parent 5a0d901 commit e185543
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2 changes: 1 addition & 1 deletion Project.toml
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Original file line number Diff line number Diff line change
Expand Up @@ -30,7 +30,7 @@ ComputationalResources = "0.3.2"
Distributions = "0.25.109"
Flux = "0.12, 0.13, 0.14"
LinearAlgebra = "1.7, 1.10"
MLJBase = ">=0.4, 1"
MLJBase = "1"
MLJFlux = "0.5"
MLJModelInterface = "1.8.0"
MLUtils = "0.4"
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138 changes: 21 additions & 117 deletions docs/Manifest.toml
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Original file line number Diff line number Diff line change
Expand Up @@ -2,7 +2,7 @@

julia_version = "1.10.4"
manifest_format = "2.0"
project_hash = "3a38b320d6e28531e4489912be325157cb3ab4b9"
project_hash = "07bab9fa5d046478b21247a44464171c6b19ad4c"

[[deps.ANSIColoredPrinters]]
git-tree-sha1 = "574baf8110975760d391c710b6341da1afa48d8c"
Expand Down Expand Up @@ -71,18 +71,6 @@ version = "2.3.0"
uuid = "0dad84c5-d112-42e6-8d28-ef12dabb789f"
version = "1.1.1"

[[deps.Arpack]]
deps = ["Arpack_jll", "Libdl", "LinearAlgebra", "Logging"]
git-tree-sha1 = "9b9b347613394885fd1c8c7729bfc60528faa436"
uuid = "7d9fca2a-8960-54d3-9f78-7d1dccf2cb97"
version = "0.5.4"

[[deps.Arpack_jll]]
deps = ["Artifacts", "CompilerSupportLibraries_jll", "JLLWrappers", "Libdl", "OpenBLAS_jll", "Pkg"]
git-tree-sha1 = "5ba6c757e8feccf03a1554dfaf3e26b3cfc7fd5e"
uuid = "68821587-b530-5797-8361-c406ea357684"
version = "3.5.1+1"

[[deps.Artifacts]]
uuid = "56f22d72-fd6d-98f1-02f0-08ddc0907c33"

Expand Down Expand Up @@ -328,12 +316,6 @@ git-tree-sha1 = "ea32b83ca4fefa1768dc84e504cc0a94fb1ab8d1"
uuid = "f0e56b4a-5159-44fe-b623-3e5288b988bb"
version = "2.4.2"

[[deps.ConformalPrediction]]
deps = ["CategoricalArrays", "MLJBase", "MLJModelInterface", "NaturalSort", "Plots", "Statistics"]
git-tree-sha1 = "520277c269dd9169fb5ae4b6eff45eeae46d4900"
uuid = "98bfc277-1877-43dc-819b-a3e38c30242f"
version = "0.1.5"

[[deps.ConstructionBase]]
deps = ["LinearAlgebra"]
git-tree-sha1 = "d8a9c0b6ac2d9081bf76324b39c78ca3ce4f0c98"
Expand All @@ -359,22 +341,6 @@ git-tree-sha1 = "439e35b0b36e2e5881738abc8857bd92ad6ff9a8"
uuid = "d38c429a-6771-53c6-b99e-75d170b6e991"
version = "0.6.3"

[[deps.CounterfactualExplanations]]
deps = ["CategoricalArrays", "ChainRulesCore", "DataFrames", "Distributions", "Flux", "LazyArtifacts", "LinearAlgebra", "Logging", "MLJBase", "MLJDecisionTreeInterface", "MLUtils", "MultivariateStats", "PackageExtensionCompat", "ProgressMeter", "Random", "Serialization", "Statistics", "StatsBase", "Tables", "TaijaBase", "UUIDs"]
git-tree-sha1 = "8a68385b6852e9357889aea661536059bc8b6158"
uuid = "2f13d31b-18db-44c1-bc43-ebaf2cff0be0"
version = "1.1.6"

[deps.CounterfactualExplanations.extensions]
DecisionTreeExt = "DecisionTree"
LaplaceReduxExt = "LaplaceRedux"
NeuroTreeExt = "NeuroTreeModels"

[deps.CounterfactualExplanations.weakdeps]
DecisionTree = "7806a523-6efd-50cb-b5f6-3fa6f1930dbb"
LaplaceRedux = "c52c1a26-f7c5-402b-80be-ba1e638ad478"
NeuroTreeModels = "1db4e0a5-a364-4b0c-897c-2bd5a4a3a1f2"

[[deps.Crayons]]
git-tree-sha1 = "249fe38abf76d48563e2f4556bebd215aa317e15"
uuid = "a8cc5b0e-0ffa-5ad4-8c14-923d3ee1735f"
Expand Down Expand Up @@ -406,12 +372,6 @@ version = "1.0.0"
deps = ["Printf"]
uuid = "ade2ca70-3891-5945-98fb-dc099432e06a"

[[deps.DecisionTree]]
deps = ["AbstractTrees", "DelimitedFiles", "LinearAlgebra", "Random", "ScikitLearnBase", "Statistics"]
git-tree-sha1 = "526ca14aaaf2d5a0e242f3a8a7966eb9065d7d78"
uuid = "7806a523-6efd-50cb-b5f6-3fa6f1930dbb"
version = "0.12.4"

[[deps.DefineSingletons]]
git-tree-sha1 = "0fba8b706d0178b4dc7fd44a96a92382c9065c2c"
uuid = "244e2a9f-e319-4986-a169-4d1fe445cd52"
Expand All @@ -435,17 +395,6 @@ git-tree-sha1 = "23163d55f885173722d1e4cf0f6110cdbaf7e272"
uuid = "b552c78f-8df3-52c6-915a-8e097449b14b"
version = "1.15.1"

[[deps.Distances]]
deps = ["LinearAlgebra", "Statistics", "StatsAPI"]
git-tree-sha1 = "66c4c81f259586e8f002eacebc177e1fb06363b0"
uuid = "b4f34e82-e78d-54a5-968a-f98e89d6e8f7"
version = "0.10.11"
weakdeps = ["ChainRulesCore", "SparseArrays"]

[deps.Distances.extensions]
DistancesChainRulesCoreExt = "ChainRulesCore"
DistancesSparseArraysExt = "SparseArrays"

[[deps.Distributed]]
deps = ["Random", "Serialization", "Sockets"]
uuid = "8ba89e20-285c-5b6f-9357-94700520ee1b"
Expand Down Expand Up @@ -911,6 +860,12 @@ version = "1.2.2"
deps = ["Artifacts", "Pkg"]
uuid = "4af54fe1-eca0-43a8-85a7-787d91b784e3"

[[deps.LearnAPI]]
deps = ["InteractiveUtils", "Statistics"]
git-tree-sha1 = "ec695822c1faaaa64cee32d0b21505e1977b4809"
uuid = "92ad9a40-7767-427a-9ee6-6e577f1266cb"
version = "0.1.0"

[[deps.LibCURL]]
deps = ["LibCURL_jll", "MozillaCACerts_jll"]
uuid = "b27032c2-a3e7-50c8-80cd-2d36dbcbfd21"
Expand Down Expand Up @@ -1015,27 +970,17 @@ git-tree-sha1 = "c1dd6d7978c12545b4179fb6153b9250c96b0075"
uuid = "e6f89c97-d47a-5376-807f-9c37f3926c36"
version = "1.0.3"

[[deps.LossFunctions]]
deps = ["Markdown", "Requires", "Statistics"]
git-tree-sha1 = "df9da07efb9b05ca7ef701acec891ee8f73c99e2"
uuid = "30fc2ffe-d236-52d8-8643-a9d8f7c094a7"
version = "0.11.1"
weakdeps = ["CategoricalArrays"]

[deps.LossFunctions.extensions]
LossFunctionsCategoricalArraysExt = "CategoricalArrays"

[[deps.MLJBase]]
deps = ["CategoricalArrays", "CategoricalDistributions", "ComputationalResources", "Dates", "DelimitedFiles", "Distributed", "Distributions", "InteractiveUtils", "InvertedIndices", "LinearAlgebra", "LossFunctions", "MLJModelInterface", "Missings", "OrderedCollections", "Parameters", "PrettyTables", "ProgressMeter", "Random", "ScientificTypes", "Serialization", "StatisticalTraits", "Statistics", "StatsBase", "Tables"]
git-tree-sha1 = "0b7307d1a7214ec3c0ba305571e713f9492ea984"
deps = ["CategoricalArrays", "CategoricalDistributions", "ComputationalResources", "Dates", "DelimitedFiles", "Distributed", "Distributions", "InteractiveUtils", "InvertedIndices", "LearnAPI", "LinearAlgebra", "MLJModelInterface", "Missings", "OrderedCollections", "Parameters", "PrettyTables", "ProgressMeter", "Random", "RecipesBase", "Reexport", "ScientificTypes", "Serialization", "StatisticalMeasuresBase", "StatisticalTraits", "Statistics", "StatsBase", "Tables"]
git-tree-sha1 = "6f45e12073bc2f2e73ed0473391db38c31e879c9"
uuid = "a7f614a8-145f-11e9-1d2a-a57a1082229d"
version = "0.21.14"
version = "1.7.0"

[[deps.MLJDecisionTreeInterface]]
deps = ["CategoricalArrays", "DecisionTree", "MLJModelInterface", "Random", "Tables"]
git-tree-sha1 = "90ef4d3b6cacec631c57cc034e1e61b4aa0ce511"
uuid = "c6f25543-311c-4c74-83dc-3ea6d1015661"
version = "0.4.2"
[deps.MLJBase.extensions]
DefaultMeasuresExt = "StatisticalMeasures"

[deps.MLJBase.weakdeps]
StatisticalMeasures = "a19d573c-0a75-4610-95b3-7071388c7541"

[[deps.MLJFlux]]
deps = ["CategoricalArrays", "ColorTypes", "ComputationalResources", "Flux", "MLJModelInterface", "Metalhead", "Optimisers", "ProgressMeter", "Random", "Statistics", "Tables"]
Expand Down Expand Up @@ -1127,12 +1072,6 @@ version = "0.7.8"
uuid = "14a3606d-f60d-562e-9121-12d972cd8159"
version = "2023.1.10"

[[deps.MultivariateStats]]
deps = ["Arpack", "Distributions", "LinearAlgebra", "SparseArrays", "Statistics", "StatsAPI", "StatsBase"]
git-tree-sha1 = "816620e3aac93e5b5359e4fdaf23ca4525b00ddf"
uuid = "6f286f6a-111f-5878-ab1e-185364afe411"
version = "0.10.3"

[[deps.NNlib]]
deps = ["Adapt", "Atomix", "ChainRulesCore", "GPUArraysCore", "KernelAbstractions", "LinearAlgebra", "Pkg", "Random", "Requires", "Statistics"]
git-tree-sha1 = "190dcada8cf9520198058c4544862b1f88c6c577"
Expand Down Expand Up @@ -1177,23 +1116,6 @@ git-tree-sha1 = "1a0fa0e9613f46c9b8c11eee38ebb4f590013c5e"
uuid = "71a1bf82-56d0-4bbc-8a3c-48b961074391"
version = "0.1.5"

[[deps.NaturalSort]]
git-tree-sha1 = "eda490d06b9f7c00752ee81cfa451efe55521e21"
uuid = "c020b1a1-e9b0-503a-9c33-f039bfc54a85"
version = "1.0.0"

[[deps.NearestNeighborModels]]
deps = ["Distances", "FillArrays", "InteractiveUtils", "LinearAlgebra", "MLJModelInterface", "NearestNeighbors", "Statistics", "StatsBase", "Tables"]
git-tree-sha1 = "e411143a8362926e4284a54e745972e939fbab78"
uuid = "636a865e-7cf4-491e-846c-de09b730eb36"
version = "0.2.3"

[[deps.NearestNeighbors]]
deps = ["Distances", "StaticArrays"]
git-tree-sha1 = "91a67b4d73842da90b526011fa85c5c4c9343fe0"
uuid = "b8a86587-4115-5ab1-83bc-aa920d37bbce"
version = "0.4.18"

[[deps.NetworkOptions]]
uuid = "ca575930-c2e3-43a9-ace4-1e988b2c1908"
version = "1.2.0"
Expand Down Expand Up @@ -1266,12 +1188,6 @@ git-tree-sha1 = "949347156c25054de2db3b166c52ac4728cbad65"
uuid = "90014a1f-27ba-587c-ab20-58faa44d9150"
version = "0.11.31"

[[deps.PackageExtensionCompat]]
git-tree-sha1 = "fb28e33b8a95c4cee25ce296c817d89cc2e53518"
uuid = "65ce6f38-6b18-4e1d-a461-8949797d7930"
version = "1.0.2"
weakdeps = ["Requires", "TOML"]

[[deps.Parameters]]
deps = ["OrderedCollections", "UnPack"]
git-tree-sha1 = "34c0e9ad262e5f7fc75b10a9952ca7692cfc5fbe"
Expand Down Expand Up @@ -1518,12 +1434,6 @@ git-tree-sha1 = "a8e18eb383b5ecf1b5e6fc237eb39255044fd92b"
uuid = "30f210dd-8aff-4c5f-94ba-8e64358c1161"
version = "3.0.0"

[[deps.ScikitLearnBase]]
deps = ["LinearAlgebra", "Random", "Statistics"]
git-tree-sha1 = "7877e55c1523a4b336b433da39c8e8c08d2f221f"
uuid = "6e75b9c4-186b-50bd-896f-2d2496a4843e"
version = "0.5.0"

[[deps.Scratch]]
deps = ["Dates"]
git-tree-sha1 = "3bac05bc7e74a75fd9cba4295cde4045d9fe2386"
Expand Down Expand Up @@ -1619,6 +1529,12 @@ git-tree-sha1 = "192954ef1208c7019899fbf8049e717f92959682"
uuid = "1e83bf80-4336-4d27-bf5d-d5a4f845583c"
version = "1.4.3"

[[deps.StatisticalMeasuresBase]]
deps = ["CategoricalArrays", "InteractiveUtils", "MLUtils", "MacroTools", "OrderedCollections", "PrecompileTools", "ScientificTypesBase", "Statistics"]
git-tree-sha1 = "17dfb22e2e4ccc9cd59b487dce52883e0151b4d3"
uuid = "c062fc1d-0d66-479b-b6ac-8b44719de4cc"
version = "0.1.1"

[[deps.StatisticalTraits]]
deps = ["ScientificTypesBase"]
git-tree-sha1 = "542d979f6e756f13f862aa00b224f04f9e445f11"
Expand Down Expand Up @@ -1704,18 +1620,6 @@ git-tree-sha1 = "598cd7c1f68d1e205689b1c2fe65a9f85846f297"
uuid = "bd369af6-aec1-5ad0-b16a-f7cc5008161c"
version = "1.12.0"

[[deps.TaijaBase]]
deps = ["CategoricalArrays", "Distributions", "Flux", "MLUtils", "Optimisers", "StatsBase", "Tables"]
git-tree-sha1 = "1c80c4472c6ab6e8c9fa544a22d907295b388dd0"
uuid = "10284c91-9f28-4c9a-abbf-ee43576dfff6"
version = "1.2.2"

[[deps.TaijaPlotting]]
deps = ["CategoricalArrays", "ConformalPrediction", "CounterfactualExplanations", "DataAPI", "Distributions", "Flux", "LaplaceRedux", "LinearAlgebra", "MLJBase", "MLUtils", "MultivariateStats", "NaturalSort", "NearestNeighborModels", "Plots"]
git-tree-sha1 = "2a4fcdf2abd5533d6d24a97ce5e89327391b2dc1"
uuid = "bd7198b4-c7d6-400c-9bab-9a24614b0240"
version = "1.1.2"

[[deps.Tar]]
deps = ["ArgTools", "SHA"]
uuid = "a4e569a6-e804-4fa4-b0f3-eef7a1d5b13e"
Expand Down
1 change: 0 additions & 1 deletion docs/Project.toml
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Original file line number Diff line number Diff line change
Expand Up @@ -12,7 +12,6 @@ Random = "9a3f8284-a2c9-5f02-9a11-845980a1fd5c"
Statistics = "10745b16-79ce-11e8-11f9-7d13ad32a3b2"
StatsBase = "2913bbd2-ae8a-5f71-8c99-4fb6c76f3a91"
Tables = "bd369af6-aec1-5ad0-b16a-f7cc5008161c"
TaijaPlotting = "bd7198b4-c7d6-400c-9bab-9a24614b0240"
Trapz = "592b5752-818d-11e9-1e9a-2b8ca4a44cd1"
Zygote = "e88e6eb3-aa80-5325-afca-941959d7151f"
cuDNN = "02a925ec-e4fe-4b08-9a7e-0d78e3d38ccd"

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