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Xy block #464

Merged
merged 29 commits into from
Mar 2, 2021
Merged

Xy block #464

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4e83b0d
Replace BlockArrays by Vector{AbstractMatrix}
dmbates Jan 15, 2021
af6d5f8
drop BlockArray dependence; modify tests
dmbates Jan 16, 2021
2cd7aec
relax tol on oxide test b/c MKL ans
dmbates Jan 16, 2021
89920dc
copyto! not copy!
dmbates Jan 18, 2021
9b37622
Use Xy in the femat field
dmbates Feb 13, 2021
88cec25
Changes in pls.jl tests
dmbates Feb 13, 2021
c698b8c
Merge branch 'master' into XyBlock
dmbates Feb 13, 2021
f1723fc
Now passing tests.
dmbates Feb 13, 2021
a011a94
Update tests and fix bugs
dmbates Feb 19, 2021
8b11a55
Remove redundant size method
dmbates Feb 23, 2021
a9dcb06
Change tolerance on failing test
dmbates Feb 23, 2021
23bd72c
Repair quote chars in doc string
dmbates Feb 23, 2021
0f33934
Change femat to Xymat. Clean up docs
dmbates Feb 25, 2021
b27089f
Merge branch 'master' of github.com:JuliaStats/MixedModels.jl into Xy…
palday Feb 26, 2021
db24fc3
packedlowertri -> block
palday Feb 26, 2021
402010e
Merge branch 'master' of github.com:JuliaStats/MixedModels.jl into Xy…
palday Feb 26, 2021
32405c1
increment row count to include response
palday Feb 26, 2021
44577c7
Add more information of fields in src/Xymat.jl
dmbates Feb 26, 2021
ac31fae
Correct the name of a testset in test/matrixterm.jl
dmbates Feb 26, 2021
3ee812d
drop describeblocks, v1.7 BLAS changes, tol for MKL
dmbates Feb 26, 2021
92f37d6
fix broken ref
palday Feb 26, 2021
1158585
Merge branch 'XyBlock' of github.com:JuliaStats/MixedModels.jl into X…
palday Feb 26, 2021
a9dbcc5
loosen tolerances on doctest
palday Feb 26, 2021
1f11c6d
restore @static in version test
dmbates Feb 26, 2021
ecc458f
Use more contrasts in benchmarks
dmbates Mar 1, 2021
7a75ebf
Add test for size of BlockedSparse
dmbates Mar 1, 2021
5be2c4f
Reinstitute a couple of tests
dmbates Mar 1, 2021
d5b23cc
Add more tests for Grouping
dmbates Mar 1, 2021
63c32db
doc hints
palday Mar 2, 2021
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2 changes: 1 addition & 1 deletion test/pls.jl
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Original file line number Diff line number Diff line change
Expand Up @@ -92,7 +92,7 @@ include("modelcache.jl")

@test logdet(fm1) ≈ 8.06014522999825 atol=0.001
@test varest(fm1) ≈ 2451.2501089607676 atol=0.001
@test pwrss(fm1) ≈ 73537.50152584909 atol=0.001
@test pwrss(fm1) ≈ 73537.50152584909 atol=0.01 # this quantity is not precisely estimated
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@test stderror(fm1) ≈ [17.69455188898009] atol=0.0001

vc = VarCorr(fm1)
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