New Motion #314
Triggered via pull request
September 13, 2024 18:31
Status
Failure
Total duration
17m 31s
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CI.yml
on: pull_request
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28 errors
Julia 1.10 - ubuntu-latest - x64 - pull_request
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Julia 1.10 - ubuntu-latest - x64 - pull_request
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Julia 1.10 - ubuntu-latest - x64 - pull_request
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Julia 1.10 - ubuntu-latest - x64 - pull_request
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Julia 1 - ubuntu-latest - x64 - pull_request
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Julia 1 - ubuntu-latest - x64 - pull_request
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Julia 1 - ubuntu-latest - x64 - pull_request
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Julia 1 - ubuntu-latest - x64 - pull_request
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Documentation:
../../../.julia/packages/Documenter/C1XEF/src/utilities/utilities.jl#L44
failed to run `@example` block in src/tutorial/03-ChemicalShiftEPI.md:18-24
```@example 03-ChemicalShiftEPI
obj = brain_phantom2D() # a slice of a brain
p1 = plot_phantom_map(obj, :T2 ; height=400, width=400, view_2d=true)
p2 = plot_phantom_map(obj, :Δw ; height=400, width=400, view_2d=true)
savefig(p1, "../assets/2-phantom1.html") # hide
savefig(p2, "../assets/2-phantom2.html") # hide
```
exception =
UndefVarError: `ph` not defined
Stacktrace:
[1] plot_phantom_map(obj::Phantom{Float64}, key::Symbol; height::Int64, width::Int64, darkmode::Bool, view_2d::Bool, colorbar::Bool, intermediate_time_samples::Int64, max_time_samples::Int64, max_spins::Int64, frame_duration_ms::Int64, kwargs::@kwargs{})
@ KomaMRIPlots ~/work/KomaMRI.jl/KomaMRI.jl/KomaMRIPlots/src/ui/DisplayFunctions.jl:1128
[2] top-level scope
@ 03-ChemicalShiftEPI.md:20
[3] eval
@ ./boot.jl:385 [inlined]
[4] #60
@ ~/.julia/packages/Documenter/C1XEF/src/expander_pipeline.jl:754 [inlined]
[5] cd(f::Documenter.var"#60#62"{Module, Expr}, dir::String)
@ Base.Filesystem ./file.jl:112
[6] (::Documenter.var"#59#61"{Documenter.Page, Module, Expr})()
@ Documenter ~/.julia/packages/Documenter/C1XEF/src/expander_pipeline.jl:753
[7] (::IOCapture.var"#5#9"{DataType, Documenter.var"#59#61"{Documenter.Page, Module, Expr}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}, Base.PipeEndpoint, Base.PipeEndpoint})()
@ IOCapture ~/.julia/packages/IOCapture/Y5rEA/src/IOCapture.jl:170
[8] with_logstate(f::Function, logstate::Any)
@ Base.CoreLogging ./logging.jl:515
[9] with_logger
@ ./logging.jl:627 [inlined]
[10] capture(f::Documenter.var"#59#61"{Documenter.Page, Module, Expr}; rethrow::Type, color::Bool, passthrough::Bool, capture_buffer::IOBuffer, io_context::Vector{Any})
@ IOCapture ~/.julia/packages/IOCapture/Y5rEA/src/IOCapture.jl:167
[11] runner(::Type{Documenter.Expanders.ExampleBlocks}, node::MarkdownAST.Node{Nothing}, page::Documenter.Page, doc::Documenter.Document)
@ Documenter ~/.julia/packages/Documenter/C1XEF/src/expander_pipeline.jl:752
|
Documentation:
../../../.julia/packages/Documenter/C1XEF/src/utilities/utilities.jl#L44
failed to run `@example` block in src/tutorial/04-3DSliceSelective.md:21-26
```@example 04-3DSliceSelective
obj = brain_phantom3D()
obj.Δw .= 0 # Removes the off-resonance
p1 = plot_phantom_map(obj, :T2 ; height=400)
savefig(p1, "../assets/3-phantom.html") # hide
```
exception =
UndefVarError: `ph` not defined
Stacktrace:
[1] plot_phantom_map(obj::Phantom{Float64}, key::Symbol; height::Int64, width::Nothing, darkmode::Bool, view_2d::Bool, colorbar::Bool, intermediate_time_samples::Int64, max_time_samples::Int64, max_spins::Int64, frame_duration_ms::Int64, kwargs::@kwargs{})
@ KomaMRIPlots ~/work/KomaMRI.jl/KomaMRI.jl/KomaMRIPlots/src/ui/DisplayFunctions.jl:1163
[2] top-level scope
@ 04-3DSliceSelective.md:24
[3] eval
@ ./boot.jl:385 [inlined]
[4] #60
@ ~/.julia/packages/Documenter/C1XEF/src/expander_pipeline.jl:754 [inlined]
[5] cd(f::Documenter.var"#60#62"{Module, Expr}, dir::String)
@ Base.Filesystem ./file.jl:112
[6] (::Documenter.var"#59#61"{Documenter.Page, Module, Expr})()
@ Documenter ~/.julia/packages/Documenter/C1XEF/src/expander_pipeline.jl:753
[7] (::IOCapture.var"#5#9"{DataType, Documenter.var"#59#61"{Documenter.Page, Module, Expr}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}, Base.PipeEndpoint, Base.PipeEndpoint})()
@ IOCapture ~/.julia/packages/IOCapture/Y5rEA/src/IOCapture.jl:170
[8] with_logstate(f::Function, logstate::Any)
@ Base.CoreLogging ./logging.jl:515
[9] with_logger
@ ./logging.jl:627 [inlined]
[10] capture(f::Documenter.var"#59#61"{Documenter.Page, Module, Expr}; rethrow::Type, color::Bool, passthrough::Bool, capture_buffer::IOBuffer, io_context::Vector{Any})
@ IOCapture ~/.julia/packages/IOCapture/Y5rEA/src/IOCapture.jl:167
[11] runner(::Type{Documenter.Expanders.ExampleBlocks}, node::MarkdownAST.Node{Nothing}, page::Documenter.Page, doc::Documenter.Document)
@ Documenter ~/.julia/packages/Documenter/C1XEF/src/expander_pipeline.jl:752
|
Documentation:
../../../.julia/packages/Documenter/C1XEF/src/utilities/utilities.jl#L44
failed to run `@example` block in src/tutorial/05-SimpleMotion.md:31-38
```@example 05-SimpleMotion
obj.motion = MotionList(
Translate(2e-2, 0.0, 0.0, TimeRange(t_start=0.0, t_end=200e-3))
)
p1 = plot_phantom_map(obj, :T2 ; height=450, intermediate_time_samples=4) # hide
savefig(p1, "../assets/5-phantom1.html") # hide
```
exception =
UndefVarError: `ph` not defined
Stacktrace:
[1] plot_phantom_map(obj::Phantom{Float64}, key::Symbol; height::Int64, width::Nothing, darkmode::Bool, view_2d::Bool, colorbar::Bool, intermediate_time_samples::Int64, max_time_samples::Int64, max_spins::Int64, frame_duration_ms::Int64, kwargs::@kwargs{})
@ KomaMRIPlots ~/work/KomaMRI.jl/KomaMRI.jl/KomaMRIPlots/src/ui/DisplayFunctions.jl:1128
[2] top-level scope
@ 05-SimpleMotion.md:35
[3] eval
@ ./boot.jl:385 [inlined]
[4] #60
@ ~/.julia/packages/Documenter/C1XEF/src/expander_pipeline.jl:754 [inlined]
[5] cd(f::Documenter.var"#60#62"{Module, Expr}, dir::String)
@ Base.Filesystem ./file.jl:112
[6] (::Documenter.var"#59#61"{Documenter.Page, Module, Expr})()
@ Documenter ~/.julia/packages/Documenter/C1XEF/src/expander_pipeline.jl:753
[7] (::IOCapture.var"#5#9"{DataType, Documenter.var"#59#61"{Documenter.Page, Module, Expr}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}, Base.PipeEndpoint, Base.PipeEndpoint})()
@ IOCapture ~/.julia/packages/IOCapture/Y5rEA/src/IOCapture.jl:170
[8] with_logstate(f::Function, logstate::Any)
@ Base.CoreLogging ./logging.jl:515
[9] with_logger
@ ./logging.jl:627 [inlined]
[10] capture(f::Documenter.var"#59#61"{Documenter.Page, Module, Expr}; rethrow::Type, color::Bool, passthrough::Bool, capture_buffer::IOBuffer, io_context::Vector{Any})
@ IOCapture ~/.julia/packages/IOCapture/Y5rEA/src/IOCapture.jl:167
[11] runner(::Type{Documenter.Expanders.ExampleBlocks}, node::MarkdownAST.Node{Nothing}, page::Documenter.Page, doc::Documenter.Document)
@ Documenter ~/.julia/packages/Documenter/C1XEF/src/expander_pipeline.jl:752
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Documentation
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Julia 1 - windows-latest - x64 - pull_request
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Julia 1 - windows-latest - x64 - pull_request
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Julia 1 - windows-latest - x64 - pull_request
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Julia 1 - windows-latest - x64 - pull_request
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Julia 1.10 - windows-latest - x64 - pull_request
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Julia 1.10 - windows-latest - x64 - pull_request
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Julia 1.10 - windows-latest - x64 - pull_request
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Julia 1.10 - windows-latest - x64 - pull_request
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Julia 1.10 - macos-12 - x64 - pull_request
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Julia 1.10 - macos-12 - x64 - pull_request
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Julia 1.10 - macos-12 - x64 - pull_request
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Julia 1.10 - macos-12 - x64 - pull_request
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Julia 1 - macos-12 - x64 - pull_request
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Julia 1 - macos-12 - x64 - pull_request
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Julia 1 - macos-12 - x64 - pull_request
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Julia 1 - macos-12 - x64 - pull_request
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