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Fixing samtools install
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James-S-Santangelo committed Dec 4, 2024
1 parent 1e51923 commit df66d62
Showing 1 changed file with 5 additions and 3 deletions.
8 changes: 5 additions & 3 deletions ngsParalog/Singularity.ngsParalog_v1.3.3
Original file line number Diff line number Diff line change
Expand Up @@ -45,11 +45,13 @@ From: ubuntu:bionic
liblzma-dev \
libcurl4-gnutls-dev \
libcrypto++-dev \
libncurses5-dev \
libncursesw5-dev

cd /opt && mkdir bin
wget https://github.com/samtools/samtools/archive/1.21.0.tar.bz2 &&
tar -xvjf 1.21.0.tar.gz && \
cd samtools-1.21.0 && \
wget https://github.com/samtools/samtools/releases/download/1.21/samtools-1.21.tar.bz2 &&
tar -xvjf samtools-1.21.tar.bz2 && \
cd samtools-1.21 && \
autoheader && \
autoconf -Who-syntax && \
./configure && \
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