packaging? rpm remove does not work #12213

ilippert · 2024-11-19T21:53:46Z

JabRef version

Other (please describe below)

Operating system

GNU / Linux

Details on version and operating system

JabRef 6.0--2024-11-17--572c823 Linux 6.11.7-300.fc41.x86_64 amd64 Java 23.0.1 JavaFX 23.0.1+4

Checked with the latest development build (copy version output from About dialog)

I made a backup of my libraries before testing the latest development version.
I have tested the latest development version and the problem persists

Steps to reproduce the behaviour

on Fedora use dnf to remove the rpm.

this does not work anymore.

Appendix

...

shell report

root@PC:~# dnf remove jabref
Package                                                           Arch            Version                                                            Repository                                Size
Removing:
 jabref                                                           x86_64          6.0.6580-1                                                         @commandline                         350.4 MiB
 jabref                                                           x86_64          6.0.6588-1                                                         <unknown>                            356.4 MiB

Transaction Summary:
 Removing:           2 packages

Is this ok [y/N]: y
Running transaction
[1/3] Prepare transaction                                                                                                                                  100% |   2.0   B/s |   2.0   B |  00m01s
>>> Running pre-uninstall scriptlet: jabref-0:6.0.6588-1.x86_64
>>> Error in pre-uninstall scriptlet: jabref-0:6.0.6588-1.x86_64
>>> Scriptlet output:
>>> /var/tmp/rpm-tmp.LOQnhY: line 116: do_if_file_belongs_to_single_package: command not found
>>> /var/tmp/rpm-tmp.LOQnhY: line 117: do_if_file_belongs_to_single_package: command not found
>>> /var/tmp/rpm-tmp.LOQnhY: line 118: do_if_file_belongs_to_single_package: command not found
>>> 
>>> [RPM] %preun(jabref-6.0.6588-1.x86_64) scriptlet failed, exit status 127
>>> Running pre-uninstall scriptlet: jabref-0:6.0.6580-1.x86_64
>>> Error in pre-uninstall scriptlet: jabref-0:6.0.6580-1.x86_64
>>> Scriptlet output:
>>> /var/tmp/rpm-tmp.w4SfXT: line 116: do_if_file_belongs_to_single_package: command not found
>>> /var/tmp/rpm-tmp.w4SfXT: line 117: do_if_file_belongs_to_single_package: command not found
>>> /var/tmp/rpm-tmp.w4SfXT: line 118: do_if_file_belongs_to_single_package: command not found
>>> 
>>> [RPM] jabref-6.0.6588-1.x86_64: erase failed
>>> [RPM] %preun(jabref-6.0.6580-1.x86_64) scriptlet failed, exit status 127
Transaction failed: Rpm transaction failed.

The text was updated successfully, but these errors were encountered:

Siedlerchr · 2024-11-21T19:00:17Z

Thanks for the report, seems like there were some jdk changes related to the spec file.

Can you test the binary from #12217 once it's ready? (there will be a comment)

Siedlerchr · 2024-11-21T19:37:08Z

https://builds.jabref.org/pull/12217/merge

HoussemNasri · 2024-11-24T21:05:39Z

Similar error on openSUSE Leap 15.5.

/var/tmp/rpm-tmp.atA3dh: line 116: do_if_file_belongs_to_single_package: command not found
/var/tmp/rpm-tmp.atA3dh: line 117: do_if_file_belongs_to_single_package: command not found
/var/tmp/rpm-tmp.atA3dh: line 118: do_if_file_belongs_to_single_package: command not found
error: %preun(jabref-6.0.6591-1.x86_64) scriptlet failed, exit status 127
error: jabref-6.0.6591-1.x86_64: erase failed
(1/1) Removing: jabref-6.0.6591-1.x86_64 .................................................................................[error]
Removal of (657)jabref-6.0.6591-1.x86_64(@System) failed:
Error: Subprocess failed. Error: RPM failed: Command exited with status 1.

ilippert · 2024-11-25T12:54:52Z

Can you test the binary from #12217 once it's ready? (there will be a comment)

tested, does not work. Now at


# dnf remove jabref*
Package                            Arch      Version                            Repository               Size
Removing:
 jabref                            x86_64    6.0.6580-1                         @commandline        350.4 MiB
 jabref                            x86_64    6.0.6588-1                         <unknown>           356.4 MiB
 jabref                            x86_64    6.0.36590-1                        <unknown>           349.4 MiB

Transaction Summary:
 Removing:           3 packages

Is this ok [y/N]: y
Running transaction
[1/4] Prepare transaction                                            100% |   2.0   B/s |   3.0   B |  00m01s
>>> Running pre-uninstall scriptlet: jabref-0:6.0.36590-1.x86_64
>>> Error in pre-uninstall scriptlet: jabref-0:6.0.36590-1.x86_64
>>> [RPM] %preun(jabref-6.0.36590-1.x86_64) scriptlet failed, exit status 1
>>> Running pre-uninstall scriptlet: jabref-0:6.0.6588-1.x86_64
>>> Error in pre-uninstall scriptlet: jabref-0:6.0.6588-1.x86_64
>>> Scriptlet output:
>>> /var/tmp/rpm-tmp.YNtwxb: line 116: do_if_file_belongs_to_single_package: command not found
>>> /var/tmp/rpm-tmp.YNtwxb: line 117: do_if_file_belongs_to_single_package: command not found
>>> /var/tmp/rpm-tmp.YNtwxb: line 118: do_if_file_belongs_to_single_package: command not found
>>> 
>>> [RPM] jabref-6.0.36590-1.x86_64: erase failed
>>> [RPM] %preun(jabref-6.0.6588-1.x86_64) scriptlet failed, exit status 127
>>> Running pre-uninstall scriptlet: jabref-0:6.0.6580-1.x86_64
>>> Error in pre-uninstall scriptlet: jabref-0:6.0.6580-1.x86_64
>>> Scriptlet output:
>>> /var/tmp/rpm-tmp.LilzB6: line 116: do_if_file_belongs_to_single_package: command not found
>>> /var/tmp/rpm-tmp.LilzB6: line 117: do_if_file_belongs_to_single_package: command not found
>>> /var/tmp/rpm-tmp.LilzB6: line 118: do_if_file_belongs_to_single_package: command not found
>>> 
>>> [RPM] jabref-6.0.6588-1.x86_64: erase failed
>>> [RPM] %preun(jabref-6.0.6580-1.x86_64) scriptlet failed, exit status 127
Transaction failed: Rpm transaction failed.

Siedlerchr · 2024-11-25T20:30:49Z

Can you please try again with https://builds.jabref.org/pull/12217/merge
Tried to add a couple of more things
I am not yet sure if this is enough, or if we need to add the util sh scripts from here as well
https://github.com/openjdk/jdk/blob/jdk-23%2B37/src/jdk.jpackage/linux/classes/jdk/jpackage/internal/resources/common_utils.sh

ilippert · 2024-11-27T17:19:15Z

Thanks, your changes did lead to changes on my side, but not a complete resolution.

:~# dnf install -y https://builds.jabref.org/pull/12217/merge/jabref-6.0-1.x86_64.rpm
Updating and loading repositories:
 Fedora 41 - x86_64 - Updates           100% |  27.0 KiB/s |  24.3 KiB |  00m01s
 Fedora 41 - x86_64 - Updates           100% | 100.2 KiB/s |   1.2 MiB |  00m12s
Repositories loaded.
 https://builds.jabref.org/pull/12217/m 100% |  64.1 MiB/s | 314.4 MiB |  00m05s
Package                 Arch   Version                  Repository          Size
Upgrading:
 jabref                 x86_64 6.0.36603-1              @commandline   349.4 MiB
   replacing jabref     x86_64 6.0.36590-1              <unknown>      349.4 MiB
   replacing jabref     x86_64 6.0.6588-1               <unknown>      356.4 MiB
   replacing jabref     x86_64 6.0.6580-1               @commandline   350.4 MiB

Transaction Summary:
 Upgrading:          1 package
 Replacing:          3 package

Total size of inbound packages is 314 MiB. Need to download 0 B.
Running transaction
[1/6] Verify package files              100% |   1.0   B/s |   1.0   B |  00m01s
[2/6] Prepare transaction               100% |   9.0   B/s |   4.0   B |  00m00s
[3/6] Upgrading jabref-0:6.0.36603-1.x8 100% | 152.1 MiB/s | 349.4 MiB |  00m02s
>>> Running pre-uninstall scriptlet: jabref-0:6.0.36590-1.x86_64
>>> Error in pre-uninstall scriptlet: jabref-0:6.0.36590-1.x86_64
>>> [RPM] %preun(jabref-6.0.36590-1.x86_64) scriptlet failed, exit status 1
>>> Running pre-uninstall scriptlet: jabref-0:6.0.6588-1.x86_64
>>> Error in pre-uninstall scriptlet: jabref-0:6.0.6588-1.x86_64
>>> Scriptlet output:
>>> /var/tmp/rpm-tmp.l2kxJg: line 116: do_if_file_belongs_to_single_package: com
>>> /var/tmp/rpm-tmp.l2kxJg: line 117: do_if_file_belongs_to_single_package: com
>>> /var/tmp/rpm-tmp.l2kxJg: line 118: do_if_file_belongs_to_single_package: com
>>> 
>>> [RPM] jabref-6.0.36590-1.x86_64: erase failed
>>> [RPM] %preun(jabref-6.0.6588-1.x86_64) scriptlet failed, exit status 127
>>> Running pre-uninstall scriptlet: jabref-0:6.0.6580-1.x86_64
>>> Error in pre-uninstall scriptlet: jabref-0:6.0.6580-1.x86_64
>>> Scriptlet output:
>>> /var/tmp/rpm-tmp.EYEhxU: line 116: do_if_file_belongs_to_single_package: com
>>> /var/tmp/rpm-tmp.EYEhxU: line 117: do_if_file_belongs_to_single_package: com
>>> /var/tmp/rpm-tmp.EYEhxU: line 118: do_if_file_belongs_to_single_package: com
>>> 
>>> [RPM] jabref-6.0.6588-1.x86_64: erase failed
>>> [RPM] %preun(jabref-6.0.6580-1.x86_64) scriptlet failed, exit status 127
Transaction failed: Rpm transaction failed.
Warning: skipped PGP checks for 1 package from repository: @commandline

Siedlerchr · 2024-12-06T16:48:56Z

Can you please try again with the latest https://builds.jabref.org/pull/12217/merge

HoussemNasri · 2024-12-07T14:11:29Z

Can you please try again with the latest https://builds.jabref.org/pull/12217/merge

It worked!

HoussemNasri · 2024-12-07T14:16:54Z

For the older versions I was able to uninstall using this command sudo rpm -e --nodeps --noscripts jabref-6.0.36590-1.x86_64.

Siedlerchr · 2024-12-09T12:17:40Z

Okay, that sounds good. Now I will try again with setting up the modified spec

Siedlerchr · 2024-12-09T12:38:36Z

@HoussemNasri Does this still work ? https://builds.jabref.org/pull/12217/merge

HoussemNasri · 2024-12-09T12:58:03Z

This one works too.

ilippert · 2024-12-09T13:12:53Z

thanks, dnf remove jabref works now

ilippert · 2024-12-09T13:36:15Z

I suggest to consider this closed

ilippert changed the title ~~rpm remove does not work~~ packaging? rpm remove does not work Nov 19, 2024

Siedlerchr added the build-system label Nov 21, 2024

Siedlerchr mentioned this issue Nov 21, 2024

try fixing rpm uninstall error #12217

Merged

7 tasks

ilippert mentioned this issue Dec 5, 2024

backup file is not removed #12265

Open

2 tasks

Siedlerchr closed this as completed in #12217 Dec 9, 2024

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packaging? rpm remove does not work #12213

packaging? rpm remove does not work #12213

ilippert commented Nov 19, 2024

Siedlerchr commented Nov 21, 2024

Siedlerchr commented Nov 21, 2024

HoussemNasri commented Nov 24, 2024

ilippert commented Nov 25, 2024

Siedlerchr commented Nov 25, 2024 •

edited

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ilippert commented Nov 27, 2024 •

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Siedlerchr commented Dec 6, 2024

HoussemNasri commented Dec 7, 2024

HoussemNasri commented Dec 7, 2024

Siedlerchr commented Dec 9, 2024

Siedlerchr commented Dec 9, 2024

HoussemNasri commented Dec 9, 2024

ilippert commented Dec 9, 2024

ilippert commented Dec 9, 2024

packaging? rpm remove does not work #12213

packaging? rpm remove does not work #12213

Comments

ilippert commented Nov 19, 2024

JabRef version

Operating system

Details on version and operating system

Checked with the latest development build (copy version output from About dialog)

Steps to reproduce the behaviour

Appendix

Siedlerchr commented Nov 21, 2024

Siedlerchr commented Nov 21, 2024

HoussemNasri commented Nov 24, 2024

ilippert commented Nov 25, 2024

Siedlerchr commented Nov 25, 2024 • edited Loading

ilippert commented Nov 27, 2024 • edited Loading

Siedlerchr commented Dec 6, 2024

HoussemNasri commented Dec 7, 2024

HoussemNasri commented Dec 7, 2024

Siedlerchr commented Dec 9, 2024

Siedlerchr commented Dec 9, 2024

HoussemNasri commented Dec 9, 2024

ilippert commented Dec 9, 2024

ilippert commented Dec 9, 2024

Siedlerchr commented Nov 25, 2024 •

edited

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ilippert commented Nov 27, 2024 •

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