Merge remote-tracking branch 'upstream/master' into importerbackgroun…

…dtask

* upstream/master:
  add language mapping for chinese
  remove chinese content
  fix hamcrest link
  Add Traditional Chinese (#7240)
  Show development information
  Allow manual trigger of the deployment workflow
  Release v5.2
  Adapt changelog for 5.2 release
  Update external-libraries.md
  checkstyle
  L10n master (#7235)
  fix fetcher architecture test
  Add missing author
  Add error dialog "Problem finding files" (#6842)
  Disable ACM, Google Scholar, JSTOR (#7229)

.github/workflows/deployment.yml

@@ -1,6 +1,7 @@
 name: Deployment
 
 on:
+  workflow_dispatch:
   push:
     branches:
       - master

AUTHORS

@@ -163,6 +163,7 @@ Hollyqqqqq
 Houssem Nasri
 hrandrianasolo
 Hussain Arif
+IfIWantedTo
 Igor Chernyavsky
 Igor Steinmacher
 Illes Solt

CHANGELOG.md

@@ -1,4 +1,3 @@
-
 # Changelog
 
 All notable changes to this project will be documented in this file.
@@ -12,13 +11,22 @@ Note that this project **does not** adhere to [Semantic Versioning](http://semve
 
 ### Added
 
+### Changed
+
+### Fixed
+
+### Removed
+
+## [5.2] – 2020-12-24
+
+### Added
+
 - We added a validation to check if the current database location is shared, preventing an exception when Pulling Changes From Shared Database. [#6959](https://github.com/JabRef/jabref/issues/6959)
 - We added a query parser and mapping layer to enable conversion of queries formulated in simplified lucene syntax by the user into api queries. [#6799](https://github.com/JabRef/jabref/pull/6799)
 - We added some basic functionality to customise the look of JabRef by importing a css theme file. [#5790](https://github.com/JabRef/jabref/issues/5790)
 - We added connection check function in network preference setting [#6560](https://github.com/JabRef/jabref/issues/6560)
 - We added support for exporting to YAML. [#6974](https://github.com/JabRef/jabref/issues/6974)
 - We added a DOI format and organization check to detect [American Physical Society](https://journals.aps.org/) journals to copy the article ID to the page field for cases where the page numbers are missing. [#7019](https://github.com/JabRef/jabref/issues/7019)
-- We added a new fetcher to enable users to search jstor.org [#6627](https://github.com/JabRef/jabref/issues/6627)
 - We added an error message in the New Entry dialog that is shown in case the fetcher did not find anything . [#7000](https://github.com/JabRef/jabref/issues/7000)
 - We added a new formatter to output shorthand month format. [#6579](https://github.com/JabRef/jabref/issues/6579)
 - We added support for the new Microsoft Edge browser in all platforms. [#7056](https://github.com/JabRef/jabref/pull/7056)
@@ -83,6 +91,7 @@ Note that this project **does not** adhere to [Semantic Versioning](http://semve
 
 ### Removed
 
+- We removed the Google Scholar fetcher and the ACM fetcher do not work due to traffic limitations [#6369](https://github.com/JabRef/jabref/issues/6369)
 - We removed the menu entry "Manage external file types" because it's already in 'Preferences' dialog [#6991](https://github.com/JabRef/jabref/issues/6991)
 - We removed the integrity check "Abbreviation detected" for the field journal/journaltitle in the entry editor [#3925](https://github.com/JabRef/jabref/issues/3925)
 
@@ -483,7 +492,8 @@ The changelog of JabRef 4.x is available at the [v4.3.1 tag](https://github.com/
 The changelog of JabRef 3.x is available at the [v3.8.2 tag](https://github.com/JabRef/jabref/blob/v3.8.2/CHANGELOG.md).
 The changelog of JabRef 2.11 and all previous versions is available as [text file in the v2.11.1 tag](https://github.com/JabRef/jabref/blob/v2.11.1/CHANGELOG).
 
-[Unreleased]: https://github.com/JabRef/jabref/compare/v5.1...HEAD
+[Unreleased]: https://github.com/JabRef/jabref/compare/v5.2...HEAD
+[5.2]: https://github.com/JabRef/jabref/compare/v5.1...v5.2
 [5.1]: https://github.com/JabRef/jabref/compare/v5.0...v5.1
 [5.0]: https://github.com/JabRef/jabref/compare/v5.0-beta...v5.0
 [5.0-beta]: https://github.com/JabRef/jabref/compare/v5.0-alpha...v5.0-beta

crowdin.yml

@@ -5,3 +5,5 @@ files:
       two_letters_code:
         pt-BR: pt_BR
         id: in
+        zh-CN: zh_CN
+        zh-TW: zh_TW

docs/adr/0009-use-plain-junit5-for-testing.md

@@ -49,7 +49,7 @@ assertFalse(actual.contains("\n"));
 
 ### Hamcrest
 
-Homepage: <http://hamcrest.org/JavaHamcrest/>
+Homepage: <https://github.com/hamcrest/JavaHamcrest>
 
 * Good, because offers advanced matchers (such as `contains`)
 * Bad, because not full fluent API

external-libraries.md

@@ -5,7 +5,7 @@ This file is manually kept in sync with build.gradle and the binary jars contain
 
 One can list all dependencies by using Gradle task `dependencyReport`.
 It generates the file [build/reports/project/dependencies.txt](build/reports/project/dependencies.txt).
-There, [one can use](https://stackoverflow.com/a/49727249/873282) `sed 's/^.* //' | sort | uniq` to flatten the dependencies.
+Below, there is a howto to generate the content at "Sorted list of runtime dependencies output by gradle".
 
 ## Legend
 
@@ -78,6 +78,13 @@ URL:     https://github.com/google/j2objc
 License: Apache-2.0
 ```
 
+```yaml
+Id:      com.googlecode.javaewah:JavaEWAH
+Project: JavaEWAH
+URL:     https://github.com/lemire/javaewah
+License: Apache-2.0
+```
+
 ```yaml
 Id:      com.ibm.icu:icu4j
 Project: International Components for Unicode for Java (ICU4J)
@@ -301,6 +308,27 @@ URL:     http://logging.apache.org/log4j/2.x/
 License: Apache-2.0
 ```
 
+```yaml
+Id:      org.apache.lucene:lucene-core
+Project: Apache Lucene
+URL:     https://lucene.apache.org/
+License: Apache-2.0
+```
+
+```yaml
+Id:      org.apache.lucene:lucene-queries
+Project: Apache Lucene
+URL:     https://lucene.apache.org/
+License: Apache-2.0
+```
+
+```yaml
+Id:      org.apache.lucene:lucene-ueryparser
+Project: Apache Lucene
+URL:     https://lucene.apache.org/
+License: Apache-2.0
+```
+
 ```yaml
 Id:      org.apache.pdfbox:fontbox
 Project: Apache PDFBox
@@ -357,6 +385,13 @@ URL:     http://fxexperience.com/controlsfx/
 License: BSD-3-Clause
 ```
 
+```yaml
+Id:      org.eclipse.jgit:org.eclipse.jgit
+Project: Eclipse JGit
+URL:     https://www.eclipse.org/jgit/
+License: BSD-3-Clause
+```
+
 ```yaml
 Id:      org.fxmisc.flowless:flowless
 Project: Flowless
@@ -435,31 +470,17 @@ License: GPL-2.0 WITH Classpath-exception-2.0
 ```
 
 ```yaml
-Id:      org.openoffice:juh
-Project: OpenOffice.org
-URL:     http://www.openoffice.org/api/SDK
-License: LGPL 3.0
+Id:      org.libreoffice:libreoffice
+Project: LibreOffice
+URL:     https://api.libreoffice.org/
+License: MPL-2.0 OR LGPL 3.0+
 ```
 
 ```yaml
-Id:      org.openoffice:jurt
-Project: OpenOffice.org
-URL:     http://www.openoffice.org/api/SDK
-License: Apache-2.0
-```
-
-```yaml
-Id:      org.openoffice:ridl
-Project: OpenOffice.org
-URL:     http://www.openoffice.org/api/SDK
-License: Apache-2.0
-```
-
-```yaml
-Id:      org.openoffice:unoil
-Project: OpenOffice.org
-URL:     http://www.openoffice.org/api/SDK
-License: Apache-2.0
+Id:      org.libreoffice:unloader
+Project: LibreOffice UNO Loader
+URL:     https://api.libreoffice.org/
+License: MPL-2.0 AND Apache-2.0
 ```
 
 ```yaml
@@ -473,20 +494,21 @@ License: BSD-3-Clause
 
 1. `gradlew dependencies > build\reports\project\dependencies.txt`
 2. Manually edit depedencies.txt to contain the tree of "compileClasspath" and "implementation" only
-3. sed 's/^.* //' < dependencies.txt | sort | uniq
+3. `sed 's/^.* //' < build/reports/project/dependencies.txt | sort | uniq > build/dependencies-for-external-libraries.txt`
 
 ```text
 com.github.tomtung:latex2unicode_2.12:0.2.6
 com.google.code.gson:gson:2.8.6
 com.google.errorprone:error_prone_annotations:2.3.4
 com.google.guava:failureaccess:1.0.1
-com.google.guava:guava:29.0-jre
+com.google.guava:guava:30.1-jre
 com.google.guava:listenablefuture:9999.0-empty-to-avoid-conflict-with-guava
 com.google.j2objc:j2objc-annotations:1.3
+com.googlecode.javaewah:JavaEWAH:1.1.7
 com.h2database:h2-mvstore:1.4.200
 com.ibm.icu:icu4j:62.1
 com.jfoenix:jfoenix:9.0.10
-com.konghq:unirest-java:3.10.00
+com.konghq:unirest-java:3.11.06
 com.microsoft.azure:applicationinsights-core:2.4.1
 com.microsoft.azure:applicationinsights-logging-log4j2:2.4.1
 com.oracle.ojdbc:ojdbc10:19.3.0.0
@@ -498,10 +520,8 @@ com.oracle.ojdbc:ucp:19.3.0.0
 com.sun.istack:istack-commons-runtime:3.0.8
 com.sun.xml.fastinfoset:FastInfoset:1.2.16
 com.tobiasdiez:easybind:2.1.0
-com.vladsch.flexmark:flexmark:0.62.2
 com.vladsch.flexmark:flexmark-ext-gfm-strikethrough:0.62.2
 com.vladsch.flexmark:flexmark-ext-gfm-tasklist:0.62.2
-com.vladsch.flexmark:flexmark-util:0.62.2
 com.vladsch.flexmark:flexmark-util-ast:0.62.2
 com.vladsch.flexmark:flexmark-util-builder:0.62.2
 com.vladsch.flexmark:flexmark-util-collection:0.62.2
@@ -513,46 +533,52 @@ com.vladsch.flexmark:flexmark-util-misc:0.62.2
 com.vladsch.flexmark:flexmark-util-options:0.62.2
 com.vladsch.flexmark:flexmark-util-sequence:0.62.2
 com.vladsch.flexmark:flexmark-util-visitor:0.62.2
+com.vladsch.flexmark:flexmark-util:0.62.2
+com.vladsch.flexmark:flexmark:0.62.2
 commons-cli:commons-cli:1.4
 commons-codec:commons-codec:1.11
 commons-logging:commons-logging:1.2
 de.jensd:fontawesomefx-commons:11.0
 de.jensd:fontawesomefx-materialdesignfont:1.7.22-11
-de.saxsys:mvvmfx:1.8.0
 de.saxsys:mvvmfx-validation:1.9.0-SNAPSHOT
+de.saxsys:mvvmfx:1.8.0
 de.undercouch:citeproc-java:2.1.0-SNAPSHOT
 eu.lestard:doc-annotations:0.2
 info.debatty:java-string-similarity:2.0.0
-io.github.java-diff-utils:java-diff-utils:4.7
+io.github.java-diff-utils:java-diff-utils:4.9
 jakarta.activation:jakarta.activation-api:1.2.1
 jakarta.annotation:jakarta.annotation-api:1.3.5
 jakarta.xml.bind:jakarta.xml.bind-api:2.3.2
 net.jcip:jcip-annotations:1.0
 net.jodah:typetools:0.6.1
-org.antlr:antlr4-runtime:4.8-1
 org.antlr:antlr-runtime:3.5.2
+org.antlr:antlr4-runtime:4.9
 org.apache.commons:commons-csv:1.8
 org.apache.commons:commons-lang3:3.9
 org.apache.commons:commons-text:1.8
 org.apache.httpcomponents:httpasyncclient:4.1.4
-org.apache.httpcomponents:httpclient:4.5.12
-org.apache.httpcomponents:httpcore:4.4.13
+org.apache.httpcomponents:httpclient:4.5.13
 org.apache.httpcomponents:httpcore-nio:4.4.13
-org.apache.httpcomponents:httpmime:4.5.12
+org.apache.httpcomponents:httpcore:4.4.13
+org.apache.httpcomponents:httpmime:4.5.13
 org.apache.logging.log4j:log4j-api:3.0.0-SNAPSHOT
 org.apache.logging.log4j:log4j-core:3.0.0-SNAPSHOT
 org.apache.logging.log4j:log4j-jcl:3.0.0-SNAPSHOT
 org.apache.logging.log4j:log4j-plugins:3.0.0-SNAPSHOT
 org.apache.logging.log4j:log4j-slf4j18-impl:3.0.0-SNAPSHOT
-org.apache.pdfbox:fontbox:2.0.20
-org.apache.pdfbox:pdfbox:2.0.20
-org.apache.pdfbox:xmpbox:2.0.20
-org.apache.tika:tika-core:1.24.1
-org.bouncycastle:bcprov-jdk15on:1.66
-org.checkerframework:checker-qual:2.11.1
-org.controlsfx:controlsfx:11.0.2
-org.fxmisc.flowless:flowless:0.6.1
-org.fxmisc.richtext:richtextfx:0.10.5
+org.apache.lucene:lucene-core:8.7.0
+org.apache.lucene:lucene-queries:8.7.0
+org.apache.lucene:lucene-queryparser:8.7.0
+org.apache.pdfbox:fontbox:2.0.22
+org.apache.pdfbox:pdfbox:2.0.22
+org.apache.pdfbox:xmpbox:2.0.22
+org.apache.tika:tika-core:1.25
+org.bouncycastle:bcprov-jdk15on:1.67
+org.checkerframework:checker-qual:3.5.0
+org.controlsfx:controlsfx:11.0.3
+org.eclipse.jgit:org.eclipse.jgit:5.10.0.202012080955-r
+org.fxmisc.flowless:flowless:0.6.2
+org.fxmisc.richtext:richtextfx:0.10.4
 org.fxmisc.undo:undofx:2.1.0
 org.fxmisc.wellbehaved:wellbehavedfx:0.3.3
 org.glassfish.hk2.external:jakarta.inject:2.6.1
@@ -566,20 +592,22 @@ org.jbibtex:jbibtex:1.0.17
 org.jetbrains:annotations:15.0
 org.jsoup:jsoup:1.13.1
 org.jvnet.staxex:stax-ex:1.8.1
-org.mariadb.jdbc:mariadb-java-client:2.6.2
-org.openjfx:javafx-base:14
-org.openjfx:javafx-controls:14
-org.openjfx:javafx-fxml:14
-org.openjfx:javafx-graphics:14
-org.openjfx:javafx-media:14
-org.openjfx:javafx-swing:14
-org.openjfx:javafx-web:14
-org.ow2.asm:asm:6.2.1
+org.libreoffice:libreoffice:7.0.3
+org.libreoffice:unoloader:7.0.4
+org.mariadb.jdbc:mariadb-java-client:2.7.1
+org.openjfx:javafx-base:15
+org.openjfx:javafx-controls:15
+org.openjfx:javafx-fxml:15
+org.openjfx:javafx-graphics:15
+org.openjfx:javafx-media:15
+org.openjfx:javafx-swing:15
+org.openjfx:javafx-web:15
 org.ow2.asm:asm-analysis:6.2.1
 org.ow2.asm:asm-commons:6.2.1
 org.ow2.asm:asm-tree:6.2.1
 org.ow2.asm:asm-util:6.2.1
-org.postgresql:postgresql:42.2.16
+org.ow2.asm:asm:6.2.1
+org.postgresql:postgresql:42.2.18
 org.reactfx:reactfx:2.0-M5
 org.scala-lang:scala-library:2.12.8
 org.slf4j:slf4j-api:2.0.0-alpha1

src/main/java/org/jabref/gui/JabRefFrame.java

@@ -773,7 +773,7 @@ private MenuBar createMenu() {
 
                 new SeparatorMenuItem(),
 
-                factory.createMenuItem(StandardActions.SET_FILE_LINKS, new AutoLinkFilesAction(this, prefs, stateManager, undoManager, Globals.TASK_EXECUTOR)),
+                factory.createMenuItem(StandardActions.SET_FILE_LINKS, new AutoLinkFilesAction(dialogService, prefs, stateManager, undoManager, Globals.TASK_EXECUTOR)),
 
                 new SeparatorMenuItem(),