Skip to content
View J35P312's full-sized avatar

Organizations

@SciLifeLab

Block or report J35P312

Block user

Prevent this user from interacting with your repositories and sending you notifications. Learn more about blocking users.

You must be logged in to block users.

Please don't include any personal information such as legal names or email addresses. Maximum 100 characters, markdown supported. This note will be visible to only you.
Report abuse

Contact GitHub support about this user’s behavior. Learn more about reporting abuse.

Report abuse
Showing results

submit jobs to slurm with quick-and-dirty python

Python 95 34 Updated Jan 3, 2023

Annotate models of genetic inheritance patterns in variant files (vcf files)

Python 79 19 Updated Feb 11, 2025

A nextflow pipeline to run Fluffy

Python 2 Updated Feb 24, 2023

CG's rare disease pipeline in next flow, see the main repo here 👇

Nextflow 5 1 Updated Jan 21, 2025

Collection of tools that are used in the facilities

2 Updated Aug 13, 2020

nim wrapper for htslib for parsing genomics data files

Nim 155 26 Updated Aug 27, 2024

My experimental tools on top of htslib. NOT OFFICIAL!!!

C 55 7 Updated Aug 16, 2023

flatten Variant Call Format(VCF)

Python 3 1 Updated Nov 23, 2021

High-performance error correction for Illumina resequencing data

TeX 69 13 Updated May 31, 2016
Python 1 Updated Mar 30, 2017

RetroSeq is a bioinformatics tool that searches for mobile element insertions from aligned reads in a BAM file and a library of reference transposable elements. Please read the wiki page (link belo…

Perl 65 26 Updated Nov 22, 2022

Gene lists and some elementary tools for handling them.

Shell 1 4 Updated Aug 26, 2016

This repository contains data indexes from NIST's Genome in a Bottle project.

Roff 242 72 Updated Nov 30, 2023

FindTranslocations

C++ 5 4 Updated Feb 7, 2017

Visualization tool for genomic data

Python 6 1 Updated Aug 25, 2016

Draw CIRCOS plots from WGS MP seq data

Shell 1 Updated Jul 31, 2015
Showing results