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fix cipos ciend for cnvkit in build_module #73

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merged 1 commit into from
Oct 18, 2024

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khurrammaqbool
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@khurrammaqbool khurrammaqbool commented Oct 17, 2024

The values for CIPOS and CIEND in the INFO of cnvkit VCF are contained in (). This causes SVDB to not add these values to the database.
In this PR I added .replace() to remove the parenthesis.

@J35P312
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J35P312 commented Oct 18, 2024

Perfect, thanks a lot!

@J35P312 J35P312 merged commit 3e95936 into J35P312:master Oct 18, 2024
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2 participants