ENH: wasm pixi configuration

For reproducible builds.

.github/workflows/wasm.yml

@@ -29,35 +29,16 @@ jobs:
 
     - uses: actions/checkout@8e5e7e5ab8b370d6c329ec480221332ada57f0ab # v3.5.2
 
-    - uses: actions/setup-node@64ed1c7eab4cce3362f8c340dee64e5eaeef8f7c # v3.6.0
-      with:
-        node-version: '22'
-
-    - name: Install
-      uses: pnpm/action-setup@v2
-      with:
-        run_install: true
-
-    - uses: actions/setup-python@61a6322f88396a6271a6ee3565807d608ecaddd1 # v4.7.0
-      with:
-        python-version: '3.11'
-
-    - name: Download test data
-      run: |
-        pnpm run test:data:download
+    - uses: prefix-dev/[email protected]
 
     - name: Build
       run: |
-        pnpm run build
+        pixi run build
 
     - name: Test TypeScript
-      working-directory: ./wasm/typescript
       run: |
-        pnpm test
+        pnpm run test-typescript
 
     - name: Test Python WASI
-      working-directory: ./wasm/python/itkwasm-elastix-wasi
       run: |
-        pip install pytest itkwasm-compare-images itk-io
-        pip install -e .
-        pytest -s
+        pixi run test-python-wasi

.gitignore

@@ -23,3 +23,4 @@ emscripten-build
 wasm/typescript/demo/
 wasm/test
 micromamba/
+.pixi/

CMakeLists.txt

@@ -6,6 +6,7 @@ if(NOT CMAKE_CXX_STANDARD OR CMAKE_CXX_STANDARD LESS 17)
   set(CMAKE_CXX_STANDARD 17)
 endif()
 
+
 if(POLICY CMP0135)
   cmake_policy(SET CMP0135 NEW)
 endif()

itk_wasm_env.bash

@@ -0,0 +1,41 @@
+#!/usr/bin/env bash
+
+function die() {
+    echo "$1"
+    exit 1
+}
+
+export ITK_WASM_DESCRIPTION=${ITK_WASM_DESCRIPTION:-$(cat package.json | jq -e -r '."itk-wasm"."description"')}
+if [[ "${ITK_WASM_DESCRIPTION}" = "null" ]]; then
+    die "itk-wasm.description not set in package.json"
+fi
+
+export ITK_WASM_REPOSITORY=${ITK_WASM_REPOSITORY:-$(cat package.json | jq -e -r '."itk-wasm"."repository"')}
+if [[ "${ITK_WASM_REPOSITORY}" = "null" ]]; then
+    die "itk-wasm.repository not set in package.json"
+fi
+
+export ITK_WASM_EMSCRIPTEN_DOCKER_IMAGE=${ITK_WASM_EMSCRIPTEN_DOCKER_IMAGE:-$(cat package.json | jq -e -r '."itk-wasm"."emscripten-docker-image" // "itkwasm/emscripten:latest"')}
+export ITK_WASM_WASI_DOCKER_IMAGE=${ITK_WASM_WASI_DOCKER_IMAGE:-$(cat package.json | jq -e -r '."itk-wasm"."wasi-docker-image" // "itkwasm/wasi:latest"')}
+
+export ITK_WASM_TEST_DATA_HASH=${ITK_WASM_TEST_DATA_HASH:-$(cat package.json | jq -e -r '."itk-wasm"."test-data-hash"')}
+export ITK_WASM_TEST_DATA_URLS=${ITK_WASM_TEST_DATA_URLS:-$(cat package.json | jq -e -r '."itk-wasm"."test-data-urls" | join(" ")')}
+
+export ITK_WASM_TYPESCRIPT_PACKAGE_NAME=${ITK_WASM_TYPESCRIPT_PACKAGE_NAME:-$(cat package.json | jq -e -r '."itk-wasm"."typescript-package-name"')}
+if [[ "${ITK_WASM_TYPESCRIPT_PACKAGE_NAME}" = "null" ]]; then
+    die "itk-wasm.typescript-package-name not set in package.json"
+fi
+export ITK_WASM_TYPESCRIPT_OUTPUT_DIR=${ITK_WASM_TYPESCRIPT_OUTPUT_DIR:-$(cat package.json | jq -e -r '."itk-wasm"."typescript-output-dir" // "typescript"')}
+
+export ITK_WASM_PYTHON_PACKAGE_NAME=${ITK_WASM_PYTHON_PACKAGE_NAME:-$(cat package.json | jq -e -r '."itk-wasm"."python-package-name"')}
+if [[ "${ITK_WASM_PYTHON_PACKAGE_NAME}" = "null" ]]; then
+    die "itk-wasm.python-package-name not set in package.json"
+fi
+export ITK_WASM_PYTHON_OUTPUT_DIR=${ITK_WASM_PYTHON_OUTPUT_DIR:-$(cat package.json | jq -e -r '."itk-wasm"."python-output-dir" // "python"')}
+
+export ITK_WASM_PACKAGE_VERSION=${ITK_WASM_PACKAGE_VERSION:-$(cat package.json | jq -e -r '."itk-wasm"."package-version"')}
+if [[ "${ITK_WASM_PACKAGE_VERSION}" = "null" ]]; then
+    die "itk-wasm.package-version not set in package.json"
+fi
+
+env

package.json

@@ -6,42 +6,26 @@
   "packageManager": "[email protected]",
   "type": "module",
   "itk-wasm": {
-    "emscripten-docker-image": "itkwasm/emscripten:20240807-3f461e68",
-    "wasi-docker-image": "itkwasm/wasi:20240807-3f461e68",
+    "description": "A toolbox for rigid and nonrigid registration of images.",
+    "repository": "https://github.com/InsightSoftwareConsortium/ITKElastix",
+    "package-version": "0.3.1",
+    "test-data-hash": "bafybeie7oon27usqjgrtxodzkbd4i6sanfwobv26c3tf7adhxop46o2f3q",
+    "test-data-urls": [
+      "https://data.kitware.com/api/v1/file/65196dede7f0366cdfec199e/download",
+      "https://bafybeid5dvqt2z4uhyal7fws5sai7vc6vgrlicknr5tdqi2phx5q7vl3qm.ipfs.w3s.link/ipfs/bafybeid5dvqt2z4uhyal7fws5sai7vc6vgrlicknr5tdqi2phx5q7vl3qm/data.tar.gz"
+    ],
+    "emscripten-docker-image": "itkwasm/emscripten:20240810-4e9a4bf0",
+    "wasi-docker-image": "itkwasm/wasi:20240810-4e9a4bf0",
     "typescript-package-name": "@itk-wasm/elastix",
     "typescript-output-dir": "wasm/typescript",
     "python-package-name": "itkwasm-elastix",
-    "python-output-dir": "wasm/python",
-    "package-description": "A toolbox for rigid and nonrigid registration of images.",
-    "repository": "https://github.com/InsightSoftwareConsortium/ITKElastix"
+    "python-output-dir": "wasm/python"
   },
   "scripts": {
-    "build": "pnpm build:gen:typescript && pnpm build:gen:python",
-    "build:emscripten": "itk-wasm pnpm-script build:emscripten",
-    "build:emscripten:debug": "itk-wasm pnpm-script build:emscripten:debug",
-    "build:wasi": "itk-wasm pnpm-script build:wasi",
-    "build:wasi:debug": "itk-wasm pnpm-script build:wasi:debug",
-    "build:python:wasi": "itk-wasm pnpm-script build:python:wasi",
-    "bindgen:typescript": "itk-wasm pnpm-script bindgen:typescript",
-    "bindgen:python": "itk-wasm pnpm-script bindgen:python",
-    "build:gen:typescript": "itk-wasm pnpm-script build:gen:typescript",
-    "build:gen:python": "itk-wasm pnpm-script build:gen:python",
-    "build:micromamba": "itk-wasm pnpm-script build:micromamba",
-    "build:python:versionSync": "itk-wasm pnpm-script build:python:versionSync",
-    "publish:python": "itk-wasm pnpm-script publish:python",
-    "test": "pnpm test:data:download && pnpm build:gen:python && pnpm test:python",
-    "test:data:download": "dam download wasm/test/data wasm/test/data.tar.gz bafybeie7oon27usqjgrtxodzkbd4i6sanfwobv26c3tf7adhxop46o2f3q https://data.kitware.com/api/v1/file/65196dede7f0366cdfec199e/download https://bafybeid5dvqt2z4uhyal7fws5sai7vc6vgrlicknr5tdqi2phx5q7vl3qm.ipfs.w3s.link/ipfs/bafybeid5dvqt2z4uhyal7fws5sai7vc6vgrlicknr5tdqi2phx5q7vl3qm/data.tar.gz",
-    "test:data:pack": "dam pack test/data test/data.tar.gz",
-    "test:python:wasi": "itk-wasm pnpm-script test:python:wasi",
-    "test:python:emscripten": "itk-wasm pnpm-script test:python:emscripten",
-    "test:python:dispatch": "itk-wasm pnpm-script test:python:emscripten",
-    "test:python": "itk-wasm pnpm-script test:python",
-    "test:wasi": "itk-wasm pnpm-script test:wasi -- -V"
   },
   "license": "Apache-2.0",
   "devDependencies": {
-    "@itk-wasm/dam": "^1.0.1",
-    "@thewtex/setup-micromamba": "^1.9.7",
-    "itk-wasm": "^1.0.0-b.177"
+    "@itk-wasm/dam": "^1.1.1",
+    "itk-wasm": "^1.0.0-b.178"
   }
 }