fix: add script

Dockerfile

@@ -5,6 +5,5 @@ RUN micromamba install -y -n base -f /tmp/env.yaml && \
 USER mambauser
 COPY --chmod=755 run.sh /tapis/run.sh
 COPY --chown=$MAMBA_USER:$MAMBA_USER main.py .
-COPY --chown=$MAMBA_USER:$MAMBA_USER dataset.csv .
 ENV PATH="/opt/conda/bin:${PATH}"
 ENTRYPOINT [ "/tapis/run.sh" ]

run.sh

@@ -1,4 +1,11 @@
 #!/bin/bash
-id
-ls -la
-python main.py ${1} ${2}
+# $1: input file
+# $2: output file
+
+if [ "$#" -ne 2 ]; then
+    echo "Usage: run.sh <input_file> <output_file>"
+    exit 1
+fi
+
+# Run the main.py file with the input and output file
+python main.py ${1} ${2}