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@IlyaLab

Shmulevich Lab, Institute for Systems Biology

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  1. CombiningDependentPvaluesUsingEBM CombiningDependentPvaluesUsingEBM Public

    Python, R and Matlab implementation of Brown's Method to combine dependent P-values

    R 25 9

  2. rf-ace rf-ace Public

    Forked from ryanbressler/rf-ace

    (backup fork since google code is going down)

    C++ 12 1

  3. gssnng gssnng Public

    Gene Set Scoring on the Nearest Neighbor Graph (gssnng) for Single Cell RNA-seq (scRNA-seq) using AnnData h5ad files.

    Jupyter Notebook 12 3

  4. BNMPy BNMPy Public

    Jupyter Notebook 4 4

  5. SeqPeek SeqPeek Public

    SeqPeek Visualization

    JavaScript 3 3

  6. Addama Addama Public

    Adaptive Data Management :: OAuth Enabled Web Services

    Python 3 3

Repositories

Showing 10 of 40 repositories
  • LogicModelMerger Public
    IlyaLab/LogicModelMerger’s past year of commit activity
    Jupyter Notebook 0 0 0 0 Updated Dec 19, 2024
  • wsinfer Public Forked from SBU-BMI/wsinfer

    🔥 🚀 Blazingly fast pipeline for patch-based classification in whole slide images

    IlyaLab/wsinfer’s past year of commit activity
    Python 0 Apache-2.0 12 0 0 Updated Dec 9, 2024
  • BNMPy Public
    IlyaLab/BNMPy’s past year of commit activity
    Jupyter Notebook 4 4 0 1 Updated Nov 19, 2024
  • gssnng Public

    Gene Set Scoring on the Nearest Neighbor Graph (gssnng) for Single Cell RNA-seq (scRNA-seq) using AnnData h5ad files.

    IlyaLab/gssnng’s past year of commit activity
    Jupyter Notebook 12 MIT 3 5 0 Updated Oct 1, 2024
  • KG_predict_DrugResponse Public
    IlyaLab/KG_predict_DrugResponse’s past year of commit activity
    Jupyter Notebook 1 1 0 0 Updated Jul 18, 2024
  • GRN_modeling Public
    IlyaLab/GRN_modeling’s past year of commit activity
    Jupyter Notebook 2 0 0 0 Updated Mar 26, 2024
  • t2d-dt-modeling Public

    Type 2 Diabetes digital twins - modeling and knowledge graph analysis

    IlyaLab/t2d-dt-modeling’s past year of commit activity
    Jupyter Notebook 0 1 0 0 Updated Nov 14, 2023
  • BigGIM Public
    IlyaLab/BigGIM’s past year of commit activity
    Jupyter Notebook 2 MIT 2 0 0 Updated Aug 7, 2023
  • SL-Cloud Public
    IlyaLab/SL-Cloud’s past year of commit activity
    Jupyter Notebook 0 Apache-2.0 4 0 0 Updated Mar 3, 2023
  • digital_twin_graph_utils Public
    IlyaLab/digital_twin_graph_utils’s past year of commit activity
    HTML 0 0 0 0 Updated Dec 14, 2022
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