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@HimesGroup

Himes Lab at the University of Pennsylvania

The Himes Lab is part of the Department of Biostatistics, Epidemiology, and Informatics and the Institute for Biomedical Informatics at the University of Pennsylvania. We are a computational group whose overarching goal is to use biomedical informatics approaches to better understand complex respiratory diseases. We do so by leveraging large publicly available datasets to gain disease insights via the integration of diverse omics data types, as well as by enhancing Electronic Health Record (EHR) data with information on social, economic and environmental factors.

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  1. BMIN503 BMIN503 Public

    Data Science for Biomedical Informatics (BMIN503 / EPID600)

    8 8

  2. BMIN503_Final_Project BMIN503_Final_Project Public

    Template repo for Data Science for Biomedical Informatics (BMIN503/EPID600) final project

    4 220

  3. snpsettest snpsettest Public

    A set-based association test using GWAS summary statistics

    R 7 3

  4. AKR AKR Public

    AKR Superfamily Website

    HTML 1 2

  5. raved raved Public

    Reproducible Analysis and Validation of Expression Data

    HTML 1 9

  6. qmtools qmtools Public

    Tools for quantitative metabolomics data processing

    R 1 1

Repositories

Showing 10 of 29 repositories
  • sapphirine Public

    Sensor-based Analysis of Pollution in the Philadelphia Region with Information on Neighborhoods and the Environment (SAPPHIRINE)

    HimesGroup/sapphirine’s past year of commit activity
    R 0 BSD-3-Clause 1 0 0 Updated Dec 17, 2024
  • pargasite Public

    Pollution-Associated Risk Geospatial Analysis SITE (PARGASITE)

    HimesGroup/pargasite’s past year of commit activity
    R 2 4 1 0 Updated Nov 18, 2024
  • BMIN503 Public

    Data Science for Biomedical Informatics (BMIN503 / EPID600)

    HimesGroup/BMIN503’s past year of commit activity
    8 8 0 0 Updated Oct 9, 2024
  • BMIN503_Final_Project Public

    Template repo for Data Science for Biomedical Informatics (BMIN503/EPID600) final project

    HimesGroup/BMIN503_Final_Project’s past year of commit activity
    4 220 0 26 Updated Sep 26, 2024
  • HLA_Typing Public

    Scripts to compute HLA types from GWAS results

    HimesGroup/HLA_Typing’s past year of commit activity
    0 BSD-3-Clause 0 0 0 Updated Jul 25, 2024
  • AKR Public

    AKR Superfamily Website

    HimesGroup/AKR’s past year of commit activity
    HTML 1 2 0 0 Updated May 8, 2024
  • LCMSQA Public

    Quality assessment for LC/MS data

    HimesGroup/LCMSQA’s past year of commit activity
    R 0 GPL-3.0 0 0 0 Updated Jan 13, 2024
  • raqs Public
    HimesGroup/raqs’s past year of commit activity
    R 0 0 0 0 Updated Nov 20, 2023
  • qmtools Public

    Tools for quantitative metabolomics data processing

    HimesGroup/qmtools’s past year of commit activity
    R 1 1 0 0 Updated Nov 15, 2023
  • snpsettest Public

    A set-based association test using GWAS summary statistics

    HimesGroup/snpsettest’s past year of commit activity
    R 7 GPL-3.0 3 0 0 Updated Sep 9, 2023

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