Remove deprecated plugins from all test manifests and replace with generics

[jmcook1186]

What
Remove any instances of deprecated plugins such as sci-e, sci-o, tdp-finder etc from example manifests

Why
We have migrated plugins to builtins and deprecated those that can easily be replaced with generics, e.g. sci-e, sci-o. However, we still have example manifests that use the deprecated plugins from if-plugins.

Prerequisites/resources
none

SoW (scope of work)

• identify all instances of deprecated plugins in example manifests and replace with generics from builtins
• documentation updated

Acceptance criteria

• All example use builtins only - nothing is imported from if-plugins
• All example manifests execute or fail in their expected manner

[zanete]

waiting to sync with @jmcook1186 to work on it together

[zanete]

@MariamKhalatova to identify the affected parts, anything where the import path is @grnsft/if-plugins or @grnsft/if-unofficial-plugins - will need to be replaced with builtins, so identifying those is the first step
Where a plugin is no longer available and no builtin exists, look for more details in https://if.greensoftware.foundation/pipelines/instance-metadata on how that explains how to access the deprecated funcitonality