Code

Mean, Normalizer, Trend and Fitting#124

Code

Merged

MuellerSeb merged 100 commits intodevelopGeoStat-Framework/GSTools:developfrom normalizerGeoStat-Framework/GSTools:normalizerCopy head branch name to clipboardMar 13, 2021

+2,490-542

Commits

Commits on Dec 21, 2020

• normalize: add base class

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• normalize: add normalize transformations

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• normalize: add to gstools init

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• normalize: add to docs

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Commits on Jan 6, 2021

• Covmodel: use 'sorted' to gain soterd opt-args

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• Normalize: add more likelihood routines

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• Merge branch 'develop' of github.com:GeoStat-Framework/GSTools into normalizer

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Commits on Jan 11, 2021

• Normalizer: add init value for self._opti

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• Tests: add stats tests for normalizer

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• Normalizer: fix bug in likelihood

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• Normalizer: fix doc typo

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• Tests: add more normalizer tests

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Commits on Jan 27, 2021

• Normalize: typo

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• merge develop

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• Examples: blackenend

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Commits on Jan 28, 2021

• Field: outsourcing helper functions

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• Normalize: add name attribute to class

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• Tools: add eval_func to misc tools

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• Field: add mean, normalizer, trend to Field class and refactoring

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• Field: use field_dim in post_field

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• SRF: add normalizer and trend

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• Krige: add normalizer and trend to base-class; refactoring; add fit_normalizer; use post_field

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• Krige: add normalizer and trend to methods (Detrended stays the same)

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• Krige: remove moved routines

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• Tests: change calling sequence in Kriging routines (trend was moved)

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• CondSRF: add support for normalizer and trend

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• Docs: update docs accordingly

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• Examples: fix call signature in ordinary kriging

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Commits on Jan 29, 2021

• Transform: better description to distinguish from normalizer

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• Normalizer: rename subpackage to 'normalizer'

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• Tests: import fix for normalizer

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• Examples: add first normalizer example

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• Examples: update Normalizers

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• Examples: use bullet points to describe mean, trend, normalizer

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• CondSRF: bug fix for trend property

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• CondSRF: consequently forward properties to kriging class

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• Krige: fix external drift bug (when using ext+int drift); adding default values for set_condition; add deleter for cond_ext_drift

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• Krige: add fit_variogram argument to automatically fit covmodel to given data

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• Krige: bugfix in ext_drift setting

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• Krige: better doc for normalizer

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• Docs: add normalizer tutorial to toctree

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• Examples: update normalizer readme

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• Examples: add second normalizer example on auto fitting

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• Examples: update auto-fit normalizer example

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• Examples: update auto-fit normalizer example again

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• Examples: update auto-fit normalizer example again

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• Examples: update auto-fit normalizer example again

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• Examples: update auto-fit normalizer example again

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• Examples: update auto-fit variogram example

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• DOC: update

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• Docs: update index

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• README: link normalizer models

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Commits on Jan 30, 2021

• README: fix link

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• Field: allow passing uninitialized Normalizer classes

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• Tools: add eval_func to doc; minor fix

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• Krige: get_mean respects normalizer now; set_condition better handles existing external drift

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• Filed: fix normalizer setting with class

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• Krige: 'get_mean' add switch to enable processing; fix kriging the mean

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• CondSRF: cleanup init; make krige a property

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• Examples: minor updates in normalizer examples

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Commits on Jan 31, 2021

• Krige: better handling of field-mean in kriging the mean

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• Field: better formatting of mean, normalizer and trend in repr

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Commits on Feb 1, 2021

• Normalizer: ignore nan-data; add range check for data; better subclassing; use 'data' as arg name

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• Docs: cleanup doc; Sphinx bugfixes (wrong refs)

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Commits on Feb 2, 2021

• Normalizer: add routines to add/remove mean-normalizer-trend

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• Variogram: add mean, normalizer, trend and fit_normalizer to variogram estimation

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• Field: use apply_mean_normalizer_trend routine

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• Doc: minor fix

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• Normalizer: fix some wrong data ranges for negative lambdas

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• Examples: add normalizer comparison example

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• Examples: saver call of normalize_range

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Commits on Feb 5, 2021

• Field: add 'dim' property that's identical to model.field_dim

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Commits on Feb 12, 2021

• Field: allow vector valued mean/trend for vector valued fields

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• Field: bugfix in mesh method: transpose vector fields

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• Merge branch 'develop' of github.com:GeoStat-Framework/GSTools into normalizer

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• Examples: update 3D vector example to use mesh method

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Commits on Feb 13, 2021

• Field: fix repr of vector mean

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Commits on Feb 22, 2021

• CondSRF: simplify field saving; remove unneeded generator value type check

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• Field: skip some string formatting routines in coverage

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• Tools: skip corner case for mean from vector in coverage

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• VectorField: add test for vector mean

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• CovModel: remove redundant __ne__ method

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• Normalizer: add __eq__ magic method

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• CondSRF: minor fix

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• Tests: more CondSRF testing

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• Tests: test comparing normalizers

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• Tests: check autofitting normalizer

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• Tests: check auto-init normalizers in krige

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• Tests: reduce places in comparison (normalizer autofit)

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• Krige: better setting of drift_functions

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• Tests: test Error raise for wrong latlon input in vario estimate

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• Tests: krige: raise check; better check kriging the mean

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• Krige: remove ext-drift deleter (confusing)

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• Tests: minor improvements

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Commits on Mar 10, 2021

• Fix typos in docstrings and comments

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Commits on Mar 13, 2021

• Normalizer: add _dx as class attribute

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• Field: rename mesh_call to generate_on_mesh; minor doc fixes

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• BoxCox: (bugfix) use correct data range for lmbda<0

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• BoxCoxShift: (bugfix) use correct data range for lmbda<0

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• Examples: change field size in Auto-fit example to prevent confusion with sample-size

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