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Release notes
Detailed changelog for version 1.10 (Release date: October 16th, 2021)
- Support of composition strings in simple and global search.
- Batch search feedback.
- Glycan List export into Byonic format.
- Sorting option for publications.
- Dropdown for Glycan ID namespace in search.
- Search result explanation function (Hit score tooltip).
- Glycosylation abundance data.
- URL passed searches.
- Glycan category on global search result for proteins.
- Add tolerance to the site search.
- Byonic sequence moved to General section.
- New Glycowork library tool in the Resources page.
- Updated former team members.
- Bug fixes.
For a detailed description of all changes see here
Detailed changelog for version 1.9 (Release date: July 12, 2021)
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Direct search from protein, glycan details page.
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Protein sequence highlighter from alignment page.
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Text search in protein sequence from protein details and alignment page.
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Filter on protein and glycan list page.
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Paper Specific Detail page.
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Phosphorylation Data in Protein detail, Sequence section, and Protvista.
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Glycation data in Protein detail, Sequence section, and Protvista.
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Subsumption information on Glycan details page.
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Added notes to Glycosylation, Mutagenesis, Phosphorylation, and Glycation.
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Added new database "GPTWiki" resource and fixed links on the Resources page.
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New presentations on the Media page.
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Bug fixing.
For a detailed description of all changes see here
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GlyGen Mapper (ID mapping).
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Supersearch.
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Cell line and tissue data.
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Protein and glycan list table display wtr to Hit score.
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CrossRef section display change.
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Tracking of IDs (merged, renamed, deleted).
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Scoring of search results.
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Pro Integration.
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History section on the detail page.
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Quick Search init used in a page.
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Site-specific search page.
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SandBox tool.
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Composition search templates.
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Bug fixing.
For a detailed description of all changes see here
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PTM annotations table in protein details.
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List of synthesized Glycans to Enzymes (Proteins) table.
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List of motifs page.
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Gene and protein names.
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Subsumption option for species search on Glycan advanced search page.
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Subsumption option for glycan ID search on Glycan advanced search page.
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Binding Protein search on Glycan advanced search page.
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Glycan Binding Protein section on Glycan details page.
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Covalently Attached Glycan search on Protein advanced search page.
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Bound Glycan search on Protein advanced search page.
For a detailed description of all changes see here
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React Migration.
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Semantic URL implementation.
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Text and style updates.
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Four new search cards on the homepage.
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New presentation on the Media page.
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Our papers on the How to Cite page.
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Updated frameworks.
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Informational pages are grouped.
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GlyGen members updates.
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Updated metadata.
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New license resources.
For a detailed description of all changes see here
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Isoform Alignment.
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Homolog Alignment.
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New Usecase added in the quick search.
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Composition Search.
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Go ID search.
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PMID search.
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Batch search on advanced protein and glycan search page.
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Multi-select option for amino acids on advanced glycoprotein search.
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Multi-select option for organisms on advanced glycan search.
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Integrate subsumption browser.
For a detailed description of all changes see here
- New "Media" page displays GlyGen presentations, talks, brochures, posters, logos, and templates.
- New "Frameworks" page acknowledgment of libraries and frameworks that used to develop GlyGen.
- New "How to cite" page displays GlyGen publications and citations.
- Sequon data on sequence view.
- Site-Specific page.
- Protvista sequence viewer.
- Search by GO term.
- Add search for pMe structures.
- Cascaded type ahead.
- Compressed file download support.
For a detailed description of all changes see here
- Added breadcrumbs on list & detail pages.
- Display of error generated by ajax failure method even if javascript code breaks.
- Global search page is more intuitive now.
- Improved new sequence display with more data and badge.
- Orthologous info on protein detail pages.
- Feedback widget on each dynamic page with contact API.
- Gene location publication and RefSeq summary to protein detail.
- Breadcrumbs lead to a proper search page (eg. Global search page when you come to a List page from there).
- Replaced "No results found" pop up alert messages with inline alert messages in search pages and quick search.
- Added help tooltip next to each label in search pages.
- Added progress bar to the feedback page.
- Added map image for mobile view in about us page.
- New team members in About us page.
- Multiple bags fixes and text changes.
For a detailed description of all changes see here
- Changed the 'Found Glycoproteins' section to a table on the glycan detail page.
- The map in the about us page is highlighted four countries with hover tooltip that involved in GlyGen's project.
- A new team members added to about us page.
- Added helpful links to find my accession numbers or IDs with hover tooltips under every input field in every search page.
- Added a motif detail page which can be accessed by clicking on one of the motif's links in the glycan detail page.
- Implementation of global search functionality.
- Added links on the disclaimer, privacy_policy pages to GitHub explaining how we tracking user activity.
- Updated Evidence display by adding color badge with the data number.
- A new "GlyGen Funding" section in about us page.
- The blue border around the selected question in the quick search page indicates that user came from the home page.
For a detailed description of all changes see here
- Added summary table for quick search results.
- Added protein sequence highlight tool on protein detail pages.
- Created simple search, advanced search, and tutorials for glycan, protein, and glycoprotein searches.
- Added download button with an option in various formats on List and Detail pages.
- Dynamic display of statistics and version info on the homepage.
- Created clickable text example for search pages.
- Improved error handling.
- Added link to the Beta server to the header.
- Several text updates, bug fixes, and improvements.
For a detailed description of all changes see here
- The initial release of the GlyGen portal.
- GlyGen Portal available with three Protein and Glycan and Glycoprotein advanced search page.
- Result of searches is available in Protein and Glycan and Glycoprotein list pages.
- Each list page provides details of Protein and Glycan available with one click on accession.
For a detailed description of all changes see here