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design and implement vcf adapter #33

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carolinebridge opened this issue Jun 14, 2021 · 2 comments
Closed

design and implement vcf adapter #33

carolinebridge opened this issue Jun 14, 2021 · 2 comments

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@carolinebridge
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controlled data on the gdc can be formatted in vcf and we need an adapter for it
@cmdcolin
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It might be useful to add this code in the main codebase. The main codebase currently only accepts "tabixed VCF" but could probably benefit from opening plain text VCF in some cases like this one

@carolinebridge carolinebridge mentioned this issue Jun 23, 2021
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@carolinebridge
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solved by GMOD/jbrowse-components#2068

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@cmdcolin @carolinebridge