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Fixes #1281 and #443 #1326

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merged 8 commits into from
Aug 9, 2022
Merged

Fixes #1281 and #443 #1326

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81189fe
#388 Added classes for soil layer
KrishnaTO Dec 19, 2021
434dde7
#443 added classes per 'soil profile'
KrishnaTO Dec 23, 2021
070dab1
fixing equivalent axioms
marieALaporte Jul 28, 2022
6501179
removing soil profile
marieALaporte Jul 28, 2022
7bb210d
creating soil layer
marieALaporte Aug 1, 2022
a3bf443
removing soil layer top and bottom as not needed
marieALaporte Aug 4, 2022
e65fa61
fixing conflicts in #1281
pbuttigieg Aug 9, 2022
5de4412
fixing https://github.com/EnvironmentOntology/envo/runs/7749735303?ch…
pbuttigieg Aug 9, 2022
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46 changes: 42 additions & 4 deletions src/envo/envo-edit.owl
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Original file line number Diff line number Diff line change
Expand Up @@ -4016,6 +4016,10 @@ Declaration(Class(<http://purl.obolibrary.org/obo/ENVO_06105123>))
Declaration(Class(<http://purl.obolibrary.org/obo/ENVO_06105124>))
Declaration(Class(<http://purl.obolibrary.org/obo/ENVO_06105125>))
Declaration(Class(<http://purl.obolibrary.org/obo/ENVO_06105126>))
Declaration(Class(<http://purl.obolibrary.org/obo/ENVO_06105225>))
Declaration(Class(<http://purl.obolibrary.org/obo/ENVO_06105226>))
Declaration(Class(<http://purl.obolibrary.org/obo/ENVO_06105266>))
Declaration(Class(<http://purl.obolibrary.org/obo/ENVO_06105267>))
Declaration(Class(<http://purl.obolibrary.org/obo/ENVO_06105268>))
Declaration(Class(<http://purl.obolibrary.org/obo/ENVO_06105269>))
Declaration(Class(<http://purl.obolibrary.org/obo/ENVO_06105300>))
Expand Down Expand Up @@ -42457,11 +42461,11 @@ SubClassOf(<http://purl.obolibrary.org/obo/ENVO_03501304> <http://purl.obolibrar

# Class: <http://purl.obolibrary.org/obo/ENVO_03501305> (pliofilm)

AnnotationAssertion(Annotation(<http://www.geneontology.org/formats/oboInOwl#hasDbXref> <https://www.merriam-webster.com/dictionary/Pliofilm>) <http://purl.obolibrary.org/obo/IAO_0000115> <http://purl.obolibrary.org/obo/ENVO_03501305> "Manufactured plastic consisting of a glossy moistureproof membrane made of rubber hydrochloride."@en)
AnnotationAssertion(Annotation(<http://www.geneontology.org/formats/oboInOwl#hasDbXref> <https://www.merriam-webster.com/dictionary/Pliofilm>) <http://purl.obolibrary.org/obo/IAO_0000115> <http://purl.obolibrary.org/obo/ENVO_03501305> "Synthetic plastic which is composed of a glossy, moistureproof membrane made of rubber hydrochloride."@en)
AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#created_by> <http://purl.obolibrary.org/obo/ENVO_03501305> <https://orcid.org/0000-0002-8844-9165>)
AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#creation_date> <http://purl.obolibrary.org/obo/ENVO_03501305> "2021-03-15T04:00:01.750Z"^^xsd:dateTime)
AnnotationAssertion(rdfs:label <http://purl.obolibrary.org/obo/ENVO_03501305> "pliofilm"@en)
SubClassOf(<http://purl.obolibrary.org/obo/ENVO_03501305> <http://purl.obolibrary.org/obo/ENVO_01000404>)
SubClassOf(<http://purl.obolibrary.org/obo/ENVO_03501305> <http://purl.obolibrary.org/obo/ENVO_06105112>)

# Class: <http://purl.obolibrary.org/obo/ENVO_03501306> (mylar)

Expand Down Expand Up @@ -43958,9 +43962,9 @@ SubClassOf(<http://purl.obolibrary.org/obo/ENVO_03600022> <http://purl.obolibrar

# Class: <http://purl.obolibrary.org/obo/ENVO_03600030> (soil horizon)

AnnotationAssertion(Annotation(<http://www.geneontology.org/formats/oboInOwl#hasDbXref> <https://en.wikipedia.org/wiki/Soil_horizon>) <http://purl.obolibrary.org/obo/IAO_0000115> <http://purl.obolibrary.org/obo/ENVO_03600030> "A layer which is parallel to the soil surface and which has roughly homogenous physical, chemical and biological properties relative to the soil layers above or beneath it."@en)
AnnotationAssertion(Annotation(<http://www.geneontology.org/formats/oboInOwl#hasDbXref> <https://en.wikipedia.org/wiki/Soil_horizon>) <http://purl.obolibrary.org/obo/IAO_0000115> <http://purl.obolibrary.org/obo/ENVO_03600030> "A soil layer which is parallel to the soil surface and which has roughly homogenous physical, chemical and biological properties relative to the soil layers above or beneath it."@en)
AnnotationAssertion(rdfs:label <http://purl.obolibrary.org/obo/ENVO_03600030> "soil horizon"@en)
SubClassOf(<http://purl.obolibrary.org/obo/ENVO_03600030> <http://purl.obolibrary.org/obo/ENVO_01000281>)
SubClassOf(<http://purl.obolibrary.org/obo/ENVO_03600030> <http://purl.obolibrary.org/obo/ENVO_06105266>)
SubClassOf(<http://purl.obolibrary.org/obo/ENVO_03600030> ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/RO_0002473> <http://purl.obolibrary.org/obo/ENVO_00001998>))

# Class: <http://purl.obolibrary.org/obo/ENVO_03600031> (earth-filled dam)
Expand Down Expand Up @@ -45183,6 +45187,40 @@ AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#inSubset> <htt
AnnotationAssertion(rdfs:label <http://purl.obolibrary.org/obo/ENVO_06105126> "weathering of plastic"@en)
SubClassOf(<http://purl.obolibrary.org/obo/ENVO_06105126> <http://purl.obolibrary.org/obo/ENVO_06105119>)

# Class: <http://purl.obolibrary.org/obo/ENVO_06105225> (soil layer top depth)

AnnotationAssertion(<http://purl.obolibrary.org/obo/IAO_0000115> <http://purl.obolibrary.org/obo/ENVO_06105225> "The depth of the top part of a soil layer."@en)
AnnotationAssertion(<http://purl.org/dc/elements/1.1/creator> <http://purl.obolibrary.org/obo/ENVO_06105225> <https://orcid.org/0000-0001-6284-4821>)
AnnotationAssertion(<http://purl.org/dc/elements/1.1/date> <http://purl.obolibrary.org/obo/ENVO_06105225> "2021-12-19T21:17:29Z"^^xsd:dateTime)
AnnotationAssertion(rdfs:label <http://purl.obolibrary.org/obo/ENVO_06105225> "soil layer top depth"@en)
SubClassOf(<http://purl.obolibrary.org/obo/ENVO_06105225> <http://purl.obolibrary.org/obo/PATO_0001595>)
SubClassOf(<http://purl.obolibrary.org/obo/ENVO_06105225> ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/RO_0000052> <http://purl.obolibrary.org/obo/ENVO_06105266>))

# Class: <http://purl.obolibrary.org/obo/ENVO_06105226> (soil layer bottom depth)

AnnotationAssertion(<http://purl.obolibrary.org/obo/IAO_0000115> <http://purl.obolibrary.org/obo/ENVO_06105226> "The depth of the bottom part of a soil layer."@en)
AnnotationAssertion(<http://purl.org/dc/elements/1.1/creator> <http://purl.obolibrary.org/obo/ENVO_06105226> <https://orcid.org/0000-0001-6284-4821>)
AnnotationAssertion(<http://purl.org/dc/elements/1.1/date> <http://purl.obolibrary.org/obo/ENVO_06105226> "2021-12-19T21:19:05Z"^^xsd:dateTime)
AnnotationAssertion(rdfs:label <http://purl.obolibrary.org/obo/ENVO_06105226> "soil layer bottom depth"@en)
SubClassOf(<http://purl.obolibrary.org/obo/ENVO_06105226> <http://purl.obolibrary.org/obo/PATO_0001595>)
SubClassOf(<http://purl.obolibrary.org/obo/ENVO_06105226> ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/RO_0000052> <http://purl.obolibrary.org/obo/ENVO_06105266>))

# Class: <http://purl.obolibrary.org/obo/ENVO_06105266> (soil layer)

AnnotationAssertion(<http://purl.obolibrary.org/obo/IAO_0000115> <http://purl.obolibrary.org/obo/ENVO_06105266> "A layer that is composed primarily of soil."@en)
AnnotationAssertion(<http://purl.org/dc/elements/1.1/creator> <http://purl.obolibrary.org/obo/ENVO_06105266> <http://orcid.org/0000-0002-8461-9745>)
AnnotationAssertion(rdfs:label <http://purl.obolibrary.org/obo/ENVO_06105266> "soil layer"@en)
EquivalentClasses(<http://purl.obolibrary.org/obo/ENVO_06105266> ObjectIntersectionOf(<http://purl.obolibrary.org/obo/ENVO_01000281> ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/RO_0002473> <http://purl.obolibrary.org/obo/ENVO_00001998>)))
SubClassOf(<http://purl.obolibrary.org/obo/ENVO_06105266> <http://purl.obolibrary.org/obo/ENVO_01000281>)

# Class: <http://purl.obolibrary.org/obo/ENVO_06105267> (soil profile characterization)

AnnotationAssertion(Annotation(<http://www.geneontology.org/formats/oboInOwl#hasDbXref> "http://www.ctahr.hawaii.edu/mauisoil/a_profile.aspx") <http://purl.obolibrary.org/obo/IAO_0000115> <http://purl.obolibrary.org/obo/ENVO_06105267> "A planned process in which the soil profile is characterized, describing the different soil horizons that composed it."@en)
AnnotationAssertion(<http://purl.org/dc/elements/1.1/creator> <http://purl.obolibrary.org/obo/ENVO_06105267> <https://orcid.org/0000-0001-6284-4821>)
AnnotationAssertion(<http://purl.org/dc/elements/1.1/date> <http://purl.obolibrary.org/obo/ENVO_06105267> "2021-12-23T04:10:36Z"^^xsd:dateTime)
AnnotationAssertion(rdfs:label <http://purl.obolibrary.org/obo/ENVO_06105267> "soil profile characterization"@en)
SubClassOf(<http://purl.obolibrary.org/obo/ENVO_06105267> <http://purl.obolibrary.org/obo/OBI_0000011>)

# Class: <http://purl.obolibrary.org/obo/ENVO_06105268> (treated wastewater)

AnnotationAssertion(Annotation(<http://www.geneontology.org/formats/oboInOwl#hasDbXref> "https://www.usgs.gov/special-topics/water-science-school/science/wastewater-treatment-water-use") <http://purl.obolibrary.org/obo/IAO_0000115> <http://purl.obolibrary.org/obo/ENVO_06105268> "Waste water which was converted into an effluent that can be either returned to the water cycle with minimal environmental issues or reused."@en)
Expand Down