Skip to content

Commit

Permalink
run robot dosdp patterns for CC & EA
Browse files Browse the repository at this point in the history 
Imported PATO term
corrected EA IRI
  • Loading branch information
@KrishnaTO
KrishnaTO committed Dec 23, 2021
1 parent 4eb8738 commit d8a1e03
Show file tree
Hide file tree
Showing 4 changed files with 239 additions and 1 deletion.
1 change: 1 addition & 0 deletions src/envo/imports/pato_terms.txt
View file
Original file line number Diff line number Diff line change
Expand Up @@ -274,3 +274,4 @@ http://purl.obolibrary.org/obo/pato#increased_in_magnitude_relative_to
http://purl.obolibrary.org/obo/PATO_0000323 # white
http://purl.obolibrary.org/obo/PATO_0001309 # duration
http://purl.obolibrary.org/obo/PATO_0040009 # bowl shaped
http://purl.obolibrary.org/obo/PATO_0000915 # thickness
111 changes: 111 additions & 0 deletions src/envo/modules/chemical_concentration.owl
View file
Original file line number Diff line number Diff line change
Expand Up @@ -525,6 +525,24 @@



<!-- http://purl.obolibrary.org/obo/ENVO_06105237 -->

<owl:Class rdf:about="http://purl.obolibrary.org/obo/ENVO_06105237"/>



<!-- http://purl.obolibrary.org/obo/ENVO_06105238 -->

<owl:Class rdf:about="http://purl.obolibrary.org/obo/ENVO_06105238"/>



<!-- http://purl.obolibrary.org/obo/ENVO_06105239 -->

<owl:Class rdf:about="http://purl.obolibrary.org/obo/ENVO_06105239"/>



<!-- http://purl.obolibrary.org/obo/ENVO_3100001 -->

<owl:Class rdf:about="http://purl.obolibrary.org/obo/ENVO_3100001">
Expand Down Expand Up @@ -4121,6 +4139,99 @@



<!-- http://purl.obolibrary.org/obo/ENVO_3200074 -->

<owl:Class rdf:about="http://purl.obolibrary.org/obo/ENVO_3200074">
<owl:equivalentClass>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/PATO_0000033"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000052"/>
<owl:someValuesFrom>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/ENVO_06105237"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000050"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/ENVO_00001998"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:someValuesFrom>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:equivalentClass>
<obo:IAO_0000115 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">The concentration of exchangeable potassium when measured in soil.</obo:IAO_0000115>
<oboInOwl:hasExactSynonym rdf:datatype="http://www.w3.org/2001/XMLSchema#string">soil exchangeable potassium concentration</oboInOwl:hasExactSynonym>
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">concentration of exchangeable potassium in soil</rdfs:label>
</owl:Class>



<!-- http://purl.obolibrary.org/obo/ENVO_3200075 -->

<owl:Class rdf:about="http://purl.obolibrary.org/obo/ENVO_3200075">
<owl:equivalentClass>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/PATO_0000033"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000052"/>
<owl:someValuesFrom>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/ENVO_06105238"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000050"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/ENVO_00001998"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:someValuesFrom>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:equivalentClass>
<obo:IAO_0000115 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">The concentration of residual water when measured in soil.</obo:IAO_0000115>
<oboInOwl:hasExactSynonym rdf:datatype="http://www.w3.org/2001/XMLSchema#string">soil residual water concentration</oboInOwl:hasExactSynonym>
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">concentration of residual water in soil</rdfs:label>
</owl:Class>



<!-- http://purl.obolibrary.org/obo/ENVO_3200076 -->

<owl:Class rdf:about="http://purl.obolibrary.org/obo/ENVO_3200076">
<owl:equivalentClass>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/PATO_0000033"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000052"/>
<owl:someValuesFrom>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/ENVO_06105239"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000050"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/ENVO_00001998"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:someValuesFrom>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:equivalentClass>
<obo:IAO_0000115 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">The concentration of exchangeable calcium when measured in soil.</obo:IAO_0000115>
<oboInOwl:hasExactSynonym rdf:datatype="http://www.w3.org/2001/XMLSchema#string">soil exchangeable calcium concentration</oboInOwl:hasExactSynonym>
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">concentration of exchangeable calcium in soil</rdfs:label>
</owl:Class>



<!-- http://purl.obolibrary.org/obo/PATO_0000033 -->

<owl:Class rdf:about="http://purl.obolibrary.org/obo/PATO_0000033"/>
Expand Down
2 changes: 1 addition & 1 deletion src/envo/modules/entity_attribute.csv
View file
Original file line number Diff line number Diff line change
Expand Up @@ -28,6 +28,6 @@ ENVO:09200025,,PATO:0000918,volume,ENVO:02500034,evaporation
ENVO:09200026,,PATO:0000918,volume,ENVO:02500033,evapotranspiration
ENVO:09200027,,PATO:0000918,volume,ENVO:01001564,rain
ENVO:09200028,,PATO:0000008,speed,ENVO:06105231,soil water infiltration
ENVO:09200029,,PATO:0000915,thickness,PATO:0000915,topsoil
ENVO:09200029,,PATO:0000915,thickness,ENVO:02000059,topsoil
ENVO:09200030,,PATO:0000008,speed,ENVO:06105241,soil drainage
ENVO:09200031,,PATO:0000080,amplitude,ENVO:01000753,air temperature
126 changes: 126 additions & 0 deletions src/envo/modules/entity_attribute.owl
View file
Original file line number Diff line number Diff line change
Expand Up @@ -99,6 +99,12 @@



<!-- http://purl.obolibrary.org/obo/ENVO_01000753 -->

<owl:Class rdf:about="http://purl.obolibrary.org/obo/ENVO_01000753"/>



<!-- http://purl.obolibrary.org/obo/ENVO_01001211 -->

<owl:Class rdf:about="http://purl.obolibrary.org/obo/ENVO_01001211"/>
Expand All @@ -111,6 +117,12 @@



<!-- http://purl.obolibrary.org/obo/ENVO_02000059 -->

<owl:Class rdf:about="http://purl.obolibrary.org/obo/ENVO_02000059"/>



<!-- http://purl.obolibrary.org/obo/ENVO_02500033 -->

<owl:Class rdf:about="http://purl.obolibrary.org/obo/ENVO_02500033"/>
Expand All @@ -129,6 +141,18 @@



<!-- http://purl.obolibrary.org/obo/ENVO_06105231 -->

<owl:Class rdf:about="http://purl.obolibrary.org/obo/ENVO_06105231"/>



<!-- http://purl.obolibrary.org/obo/ENVO_06105241 -->

<owl:Class rdf:about="http://purl.obolibrary.org/obo/ENVO_06105241"/>



<!-- http://purl.obolibrary.org/obo/ENVO_09200000 -->

<owl:Class rdf:about="http://purl.obolibrary.org/obo/ENVO_09200000">
Expand Down Expand Up @@ -633,6 +657,90 @@



<!-- http://purl.obolibrary.org/obo/ENVO_09200028 -->

<owl:Class rdf:about="http://purl.obolibrary.org/obo/ENVO_09200028">
<owl:equivalentClass>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/PATO_0000008"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000052"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/ENVO_06105231"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:equivalentClass>
<obo:IAO_0000115 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">The speed of some soil water infiltration.</obo:IAO_0000115>
<oboInOwl:hasExactSynonym rdf:datatype="http://www.w3.org/2001/XMLSchema#string">soil water infiltration speed</oboInOwl:hasExactSynonym>
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">speed of soil water infiltration</rdfs:label>
</owl:Class>



<!-- http://purl.obolibrary.org/obo/ENVO_09200029 -->

<owl:Class rdf:about="http://purl.obolibrary.org/obo/ENVO_09200029">
<owl:equivalentClass>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/PATO_0000915"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000052"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/ENVO_02000059"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:equivalentClass>
<obo:IAO_0000115 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">The thickness of some topsoil.</obo:IAO_0000115>
<oboInOwl:hasExactSynonym rdf:datatype="http://www.w3.org/2001/XMLSchema#string">topsoil thickness</oboInOwl:hasExactSynonym>
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">thickness of topsoil</rdfs:label>
</owl:Class>



<!-- http://purl.obolibrary.org/obo/ENVO_09200030 -->

<owl:Class rdf:about="http://purl.obolibrary.org/obo/ENVO_09200030">
<owl:equivalentClass>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/PATO_0000008"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000052"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/ENVO_06105241"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:equivalentClass>
<obo:IAO_0000115 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">The speed of some soil drainage.</obo:IAO_0000115>
<oboInOwl:hasExactSynonym rdf:datatype="http://www.w3.org/2001/XMLSchema#string">soil drainage speed</oboInOwl:hasExactSynonym>
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">speed of soil drainage</rdfs:label>
</owl:Class>



<!-- http://purl.obolibrary.org/obo/ENVO_09200031 -->

<owl:Class rdf:about="http://purl.obolibrary.org/obo/ENVO_09200031">
<owl:equivalentClass>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/PATO_0000080"/>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000052"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/ENVO_01000753"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:equivalentClass>
<obo:IAO_0000115 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">The amplitude of some air temperature.</obo:IAO_0000115>
<oboInOwl:hasExactSynonym rdf:datatype="http://www.w3.org/2001/XMLSchema#string">air temperature amplitude</oboInOwl:hasExactSynonym>
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">amplitude of air temperature</rdfs:label>
</owl:Class>



<!-- http://purl.obolibrary.org/obo/ENVO_3100030 -->

<owl:Class rdf:about="http://purl.obolibrary.org/obo/ENVO_3100030">
Expand Down Expand Up @@ -717,6 +825,12 @@



<!-- http://purl.obolibrary.org/obo/PATO_0000008 -->

<owl:Class rdf:about="http://purl.obolibrary.org/obo/PATO_0000008"/>



<!-- http://purl.obolibrary.org/obo/PATO_0000014 -->

<owl:Class rdf:about="http://purl.obolibrary.org/obo/PATO_0000014"/>
Expand All @@ -735,6 +849,12 @@



<!-- http://purl.obolibrary.org/obo/PATO_0000080 -->

<owl:Class rdf:about="http://purl.obolibrary.org/obo/PATO_0000080"/>



<!-- http://purl.obolibrary.org/obo/PATO_0000141 -->

<owl:Class rdf:about="http://purl.obolibrary.org/obo/PATO_0000141"/>
Expand All @@ -747,6 +867,12 @@



<!-- http://purl.obolibrary.org/obo/PATO_0000915 -->

<owl:Class rdf:about="http://purl.obolibrary.org/obo/PATO_0000915"/>



<!-- http://purl.obolibrary.org/obo/PATO_0000918 -->

<owl:Class rdf:about="http://purl.obolibrary.org/obo/PATO_0000918"/>
Expand Down

0 comments on commit d8a1e03

Please sign in to comment.