Merge pull request #179 from nitin-ebi/contig-translation

Filter out null assembly code
EBIvariation · Sep 20, 2024 · 721744f · 721744f
2 parents fe26df2 + 5f05d12
commit 721744f
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/eva-lib/src/main/java/uk/ac/ebi/eva/lib/utils/TaxonomyUtils.java b/eva-lib/src/main/java/uk/ac/ebi/eva/lib/utils/TaxonomyUtils.java
@@ -13,7 +13,7 @@ public class TaxonomyUtils {
 
     public Optional<String> getAssemblyAccessionForAssemblyCode(String assemblyCode) {
         return taxonomyRepository.getBrowsableSpecies().stream()
-                .filter(t -> t.getAssemblyCode().equals(assemblyCode))
+                .filter(t -> t != null && t.getAssemblyCode() != null && t.getAssemblyCode().equals(assemblyCode))
                 .map(t -> t.getAssemblyAccession())
                 .findFirst();
     }