Skip to content

v1.4.0

Latest
Latest
Compare
Choose a tag to compare
@tgurbich tgurbich released this 23 Dec 10:57
v1.4.0
a70e121
This commit was created on GitHub.com and signed with GitHub’s verified signature.
GPG key ID: B5690EEEBB952194
Learn about vigilant mode.

What's Changed

  • Added a pseudogene and spurious ORF detection workflow by @tgurbich in #49 and by @mberacochea in #51.
    Pseudofinder is used to identify pseudogenes, in addition to the pseudogene detection workflow that is part of Bakta. CDS with AntiFam hits are now removed from the final GFF output.
  • Added output modifications, generation of an additional GFF file and README instructions to simplify ENA/GenBank submission by @tgurbich in #52.
  • Mettannotator now uses the 'rRNA' feature for ribosomal RNA instead of grouping it with ncRNA as was done in previous versions. ncRNA classes are now added to the ninth column for ncRNA by @tgurbich in #52.
  • Added tRNA locus tags by @tgurbich in #50
  • Fixed temporary directory handling for multiple tools (Prokka, InterProScan, tRNAscan-SE, CRISPRCasFinder, AMRFinderPlus) by implementing process-specific tmp directories in workdir by @mberacochea in #46
  • Added more instructions for Nextflow run by @mberacochea in #48

Full Changelog: v1.3...v1.4.0

Contributors

mberacochea and tgurbich
Assets 2
Loading