Removed changing collection date to lowercase as this was failing checks

EBI-Metagenomics · Jul 25, 2024 · bea6b38 · bea6b38
1 parent 7ff357d
commit bea6b38
Showing 1 changed file with 2 additions and 2 deletions.
diff --git a/genomeuploader/genome_upload.py b/genomeuploader/genome_upload.py
@@ -428,8 +428,8 @@ def extract_ENA_info(genomeInfo, uploadDir, webin, password):
                         if not country in GEOGRAPHIC_LOCATIONS:
                             country = "not provided"
 
-                        collectionDate = sampleInfo["collection_date"].lower()
-                        if not collectionDate or collectionDate == "missing" or collectionDate in \
+                        collectionDate = sampleInfo["collection_date"]
+                        if not collectionDate or collectionDate.lower() == "missing" or collectionDate.lower() in \
                                 ["not applicable", "not available", "na"]:
                             collectionDate = "not provided"