mounts test data volume in GHA test

EBI-Metagenomics · Dec 16, 2024 · fc4fbd3 · fc4fbd3
1 parent c71d3f5
commit fc4fbd3
Showing 1 changed file with 3 additions and 1 deletion.
diff --git a/.github/workflows/test.yml b/.github/workflows/test.yml
@@ -36,7 +36,9 @@ jobs:
 
       - name: Run tests
         run: |
-          docker run -v ${{ github.workspace }}/coverage:/app/coverage --entrypoint bash \
+          docker run -v ${{ github.workspace }}/coverage:/app/coverage \
+          -v ${{ github.workspace }}/slurm-dev-environment/fs/nfs/public:/app/data \
+          --entrypoint bash \
           --add-host=host.docker.internal:host-gateway \
           -e DATABASE_URL=postgres://postgres:[email protected]:5432/emg --rm app:latest -c pytest