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Fix issue with Silva having domain and superkingdom taxonomic ranks both converted to superkingdom (D) in Kraken#745

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Thomas-Bcp wants to merge 1 commit intoDerrickWood:masterfrom Thomas-Bcp:Fix-issue-with-Silva-having-domain-and-superkingdom-taxonomic-ranks-both-converted-to-superkingdom-(D)-in-Kraken
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