Skip to content

Issues: DeepRank/deeprank2

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

24 Open 315 Closed
24 Open 315 Closed
Author
Filter by author
Loading
Label
Filter by label
Loading
Use alt + click/return to exclude labels
or ⇧ + click/return for logical OR
Projects
Filter by project
Loading
Milestones
Filter by milestone
Loading
Assignee
Filter by who’s assigned
Sort
Sort by
Newest Oldest Most commented Least commented Recently updated Least recently updated Best match
Most reactions
👍 👎 😄 🎉 😕 ❤️ 🚀 👀

Issues list

re-order add_feature arguments covariates modules from the 'features' subpackage disc Discussion needed, to better define the task/s stale issue not touched from too much time
#633 opened Jul 22, 2024 by DaniBodor
3
Add single proteins/molecules class stale issue not touched from too much time
#605 opened May 21, 2024 by gcroci2
Provide the trained models for various scenarios. feature New feature to add stale issue not touched from too much time
#602 opened Mar 22, 2024 by amjjbonvin
5
Create a tutorial for the antibody-antigen docking models use case blocked
#556 opened Jan 15, 2024 by gcroci2 M1.4: Tutorials&Datasets
Create a tutorial for the protein-ligand complexes use case blocked
#555 opened Jan 15, 2024 by gcroci2 M1.4: Tutorials&Datasets
Add example data for antibody-antigen docking models use case disc Discussion needed, to better define the task/s needs info more information is needed stale issue not touched from too much time
#553 opened Jan 15, 2024 by gcroci2 M1.4: Tutorials&Datasets
1
Add example data for protein-ligand complexes use case disc Discussion needed, to better define the task/s needs info more information is needed stale issue not touched from too much time
#552 opened Jan 15, 2024 by gcroci2 M1.4: Tutorials&Datasets
1
Create tests and docs for multiple-chain graphs blocked
#551 opened Jan 15, 2024 by gcroci2 M1.3: Multiple-chains
Create tests and docs for protein-ligand graphs blocked
#550 opened Jan 15, 2024 by gcroci2 M1.2: Protein-ligands
Deal with residue features in protein-ligand graphs blocked
#548 opened Jan 15, 2024 by DaniBodor M1.2: Protein-ligands
Allow for multiple-chain graphs blocking This issue blocks the others disc Discussion needed, to better define the task/s stale issue not touched from too much time
#547 opened Jan 15, 2024 by gcroci2 M1.3: Multiple-chains
6
Consider allowing mixed resolution graphs for protein-ligand graphs blocked disc Discussion needed, to better define the task/s
#546 opened Jan 15, 2024 by gcroci2 M1.2: Protein-ligands
Create tests and docs for protein-nucleic acid graphs blocked
#545 opened Jan 15, 2024 by DaniBodor M1.1: Protein-nucleic acids
Allow for none-residue atom entries for protein-ligand graphs blocking This issue blocks the others stale issue not touched from too much time
#544 opened Jan 15, 2024 by gcroci2 M1.2: Protein-ligands
1
Add nucleotides to aminoacidlist for protein-nucleic acid graphs blocking This issue blocks the others stale issue not touched from too much time
#543 opened Jan 15, 2024 by DaniBodor M1.1: Protein-nucleic acids
4
Fix build for Python 3.11 blocked bug Something isn't working CI continuous integration
#540 opened Jan 3, 2024 by gcroci2
1
@gcroci2
3
Make MapMethod an attribute of GridSettings in deeprank2.grid module nice to have low priority issues stale issue not touched from too much time
#516 opened Nov 1, 2023 by DaniBodor
1
make _set_feature_modules to return ModuleType objects nice to have low priority issues stale issue not touched from too much time
#512 opened Oct 9, 2023 by DaniBodor
1
variant residue is only added to atomic graphs, but not residue graphs bug Something isn't working needs info more information is needed stale issue not touched from too much time
#511 opened Oct 9, 2023 by DaniBodor
1
Integrate PDBprep feature New feature to add stale issue not touched from too much time tools tools for users to interact with deeprank
#509 opened Oct 4, 2023 by DaniBodor
1
@DaniBodor
2
Refactor deeprank2.tools.target.add_targets function nice to have low priority issues stale issue not touched from too much time
#499 opened Sep 20, 2023 by gcroci2
1
Create feature classes nice to have low priority issues stale issue not touched from too much time
#486 opened Sep 5, 2023 by DaniBodor
2
Bug: No error message when no value calculated for HSE covariates modules from the 'features' subpackage stale issue not touched from too much time
#402 opened Mar 22, 2023 by Max1461
@DaniBodor
9
Fix usage for multiple GPUs Trainer trainer module related issues
#325 opened Jan 20, 2023 by gcroci2
@gcroci2
1
ProTip! Find all open issues with in progress development work with linked:pr.