Update precommit (#108)

* Update precommit * Update jupytext. Co-authored-by: renovate[bot] <29139614+renovate[bot]@users.noreply.github.com> Co-authored-by: Ben Thompson <[email protected]>
Confirm-Solutions · Nov 3, 2022 · fb15486 · fb15486
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diff --git a/.pre-commit-config.yaml b/.pre-commit-config.yaml
@@ -1,7 +1,7 @@
 fail_fast: false
 repos:
   - repo: https://github.com/psf/black
-    rev: 22.3.0
+    rev: 22.10.0
     hooks:
       - id: black
         language_version: python3
@@ -11,17 +11,17 @@ repos:
       - id: flake8
         exclude: anarchy
   - repo: https://github.com/asottile/reorder_python_imports
-    rev: v3.8.1
+    rev: v3.9.0
     hooks:
     -   id: reorder-python-imports
   - repo: https://github.com/mwouts/jupytext
-    rev: v1.13.8
+    rev: v1.14.1
     hooks:
       - id: jupytext
         args: [--from, ipynb, --to, "md"]
         exclude: anarchy
   - repo: https://github.com/pre-commit/pre-commit-hooks
-    rev: v4.0.1
+    rev: v4.3.0
     hooks:
       - id: debug-statements
       - id: detect-aws-credentials

diff --git a/docs/tutorial/tilt-bound.md b/docs/tutorial/tilt-bound.md
@@ -5,7 +5,7 @@ jupyter:
       extension: .md
       format_name: markdown
       format_version: '1.3'
-      jupytext_version: 1.13.8
+      jupytext_version: 1.14.1
   kernelspec:
     display_name: Python 3.10.5 ('confirm')
     language: python

diff --git a/imprint/.pre-commit-config.yaml b/imprint/.pre-commit-config.yaml
@@ -7,7 +7,7 @@ repos:
         args: [-i]
       # - id: clang-tidy
   - repo: https://github.com/psf/black
-    rev: 22.3.0
+    rev: 22.10.0
     hooks:
       - id: black
         language_version: python3
@@ -16,16 +16,16 @@ repos:
     hooks:
       - id: flake8
   - repo: https://github.com/asottile/reorder_python_imports
-    rev: v3.8.1
+    rev: v3.9.0
     hooks:
       - id: reorder-python-imports
   - repo: https://github.com/mwouts/jupytext
-    rev: v1.13.8
+    rev: v1.14.1
     hooks:
     - id: jupytext
       args: [--from, ipynb, --to, "md"]
   - repo: https://github.com/pre-commit/pre-commit-hooks
-    rev: v4.0.1
+    rev: v4.3.0
     hooks:
       - id: debug-statements
       - id: detect-aws-credentials

diff --git a/imprint/research/berry/tutorial.md b/imprint/research/berry/tutorial.md
@@ -5,7 +5,7 @@ jupyter:
       extension: .md
       format_name: markdown
       format_version: '1.3'
-      jupytext_version: 1.13.8
+      jupytext_version: 1.14.1
   kernelspec:
     display_name: Python 3.10.5 (conda)
     language: python

diff --git a/research/adagrid/adagrid.md b/research/adagrid/adagrid.md
@@ -5,7 +5,7 @@ jupyter:
       extension: .md
       format_name: markdown
       format_version: '1.3'
-      jupytext_version: 1.13.8
+      jupytext_version: 1.14.1
   kernelspec:
     display_name: Python 3.10.5 ('confirm')
     language: python

diff --git a/research/adagrid/bayes2022_figs.md b/research/adagrid/bayes2022_figs.md
@@ -5,7 +5,7 @@ jupyter:
       extension: .md
       format_name: markdown
       format_version: '1.3'
-      jupytext_version: 1.13.8
+      jupytext_version: 1.14.1
   kernelspec:
     display_name: Python 3.10.6 ('base')
     language: python

diff --git a/research/adagrid/inspector.md b/research/adagrid/inspector.md
@@ -5,7 +5,7 @@ jupyter:
       extension: .md
       format_name: markdown
       format_version: '1.3'
-      jupytext_version: 1.13.8
+      jupytext_version: 1.14.1
   kernelspec:
     display_name: Python 3.10.5 ('confirm')
     language: python

diff --git a/research/adagrid/lewis_ada.md b/research/adagrid/lewis_ada.md
@@ -5,7 +5,7 @@ jupyter:
       extension: .md
       format_name: markdown
       format_version: '1.3'
-      jupytext_version: 1.13.8
+      jupytext_version: 1.14.1
   kernelspec:
     display_name: Python 3.10.5 ('confirm')
     language: python

diff --git a/research/adagrid/plotter.md b/research/adagrid/plotter.md
@@ -5,7 +5,7 @@ jupyter:
       extension: .md
       format_name: markdown
       format_version: '1.3'
-      jupytext_version: 1.13.8
+      jupytext_version: 1.14.1
   kernelspec:
     display_name: Python 3.10.5 ('confirm')
     language: python

diff --git a/research/adagrid/rpe.md b/research/adagrid/rpe.md
@@ -5,7 +5,7 @@ jupyter:
       extension: .md
       format_name: markdown
       format_version: '1.3'
-      jupytext_version: 1.13.8
+      jupytext_version: 1.14.1
   kernelspec:
     display_name: Python 3.10.6 ('base')
     language: python

diff --git a/research/adagrid/tuning.md b/research/adagrid/tuning.md
@@ -5,7 +5,7 @@ jupyter:
       extension: .md
       format_name: markdown
       format_version: '1.3'
-      jupytext_version: 1.13.8
+      jupytext_version: 1.14.1
   kernelspec:
     display_name: Python 3.10.6 ('base')
     language: python

diff --git a/research/berry/alex_jaxinla.md b/research/berry/alex_jaxinla.md
@@ -5,7 +5,7 @@ jupyter:
       extension: .md
       format_name: markdown
       format_version: '1.3'
-      jupytext_version: 1.13.8
+      jupytext_version: 1.14.1
   kernelspec:
     display_name: Python 3.10.5 ('imprint')
     language: python

diff --git a/research/berry/berry_imprint.md b/research/berry/berry_imprint.md
@@ -5,7 +5,7 @@ jupyter:
       extension: .md
       format_name: markdown
       format_version: '1.3'
-      jupytext_version: 1.13.8
+      jupytext_version: 1.14.1
   kernelspec:
     display_name: Python 3.10.5 ('confirm')
     language: python

diff --git a/research/berry/berry_marginal_playground.md b/research/berry/berry_marginal_playground.md
@@ -6,7 +6,7 @@ jupyter:
       extension: .md
       format_name: markdown
       format_version: '1.3'
-      jupytext_version: 1.13.8
+      jupytext_version: 1.14.1
   kernelspec:
     display_name: Python 3.10.2 ('imprint')
     language: python

diff --git a/research/berry/berry_part1.md b/research/berry/berry_part1.md
@@ -6,7 +6,7 @@ jupyter:
       extension: .md
       format_name: markdown
       format_version: '1.3'
-      jupytext_version: 1.13.8
+      jupytext_version: 1.14.1
   kernelspec:
     display_name: Python 3.10.5 ('confirm')
     language: python

diff --git a/research/berry/berry_part3_simulation.md b/research/berry/berry_part3_simulation.md
@@ -6,7 +6,7 @@ jupyter:
       extension: .md
       format_name: markdown
       format_version: '1.3'
-      jupytext_version: 1.13.8
+      jupytext_version: 1.14.1
   kernelspec:
     display_name: Python 3.10.2 ('imprint')
     language: python

diff --git a/research/berry/exact_typeI.md b/research/berry/exact_typeI.md
@@ -5,7 +5,7 @@ jupyter:
       extension: .md
       format_name: markdown
       format_version: '1.3'
-      jupytext_version: 1.13.8
+      jupytext_version: 1.14.1
   kernelspec:
     display_name: Python 3.10.2 ('imprint')
     language: python

diff --git a/research/berry/intro_to_inla.md b/research/berry/intro_to_inla.md
@@ -6,7 +6,7 @@ jupyter:
       extension: .md
       format_name: markdown
       format_version: '1.3'
-      jupytext_version: 1.13.8
+      jupytext_version: 1.14.1
   kernelspec:
     display_name: Python 3.10.5 ('base')
     language: python

diff --git a/research/berry/quadrature_dev.md b/research/berry/quadrature_dev.md
@@ -5,7 +5,7 @@ jupyter:
       extension: .md
       format_name: markdown
       format_version: '1.3'
-      jupytext_version: 1.13.8
+      jupytext_version: 1.14.1
   kernelspec:
     display_name: Python 3.10.4 ('imprint')
     language: python

diff --git a/research/berry/sage_analytical.md b/research/berry/sage_analytical.md
@@ -5,7 +5,7 @@ jupyter:
       extension: .md
       format_name: markdown
       format_version: '1.3'
-      jupytext_version: 1.13.8
+      jupytext_version: 1.14.1
   kernelspec:
     display_name: SageMath 9.4
     language: sage

diff --git a/research/boundplay/bound_experiments.md b/research/boundplay/bound_experiments.md
@@ -5,7 +5,7 @@ jupyter:
       extension: .md
       format_name: markdown
       format_version: '1.3'
-      jupytext_version: 1.13.8
+      jupytext_version: 1.14.1
   kernelspec:
     display_name: Python 3.10.6 ('base')
     language: python

diff --git a/research/boundplay/cp_intervals.md b/research/boundplay/cp_intervals.md
@@ -5,7 +5,7 @@ jupyter:
       extension: .md
       format_name: markdown
       format_version: '1.3'
-      jupytext_version: 1.13.8
+      jupytext_version: 1.14.1
   kernelspec:
     display_name: Python 3.10.5 ('confirm')
     language: python

diff --git a/research/boundplay/odi_constant.md b/research/boundplay/odi_constant.md
@@ -5,7 +5,7 @@ jupyter:
       extension: .md
       format_name: markdown
       format_version: '1.3'
-      jupytext_version: 1.13.8
+      jupytext_version: 1.14.1
   kernelspec:
     display_name: Python 3.10.5 ('confirm')
     language: python

diff --git a/research/boundplay/playtime.md b/research/boundplay/playtime.md
@@ -5,7 +5,7 @@ jupyter:
       extension: .md
       format_name: markdown
       format_version: '1.3'
-      jupytext_version: 1.13.8
+      jupytext_version: 1.14.1
   kernelspec:
     display_name: Python 3.10.5
     language: python

diff --git a/research/boundplay/playtime_binomial.md b/research/boundplay/playtime_binomial.md
@@ -5,7 +5,7 @@ jupyter:
       extension: .md
       format_name: markdown
       format_version: '1.3'
-      jupytext_version: 1.13.8
+      jupytext_version: 1.14.1
   kernelspec:
     display_name: Python 3.10.5 ('confirm')
     language: python

diff --git a/research/database/db_test.md b/research/database/db_test.md
@@ -5,7 +5,7 @@ jupyter:
       extension: .md
       format_name: markdown
       format_version: '1.3'
-      jupytext_version: 1.13.8
+      jupytext_version: 1.14.1
   kernelspec:
     display_name: Python 3.10.5 ('confirm')
     language: python

diff --git a/research/direct_bayes/dirtymultilevel.md b/research/direct_bayes/dirtymultilevel.md
@@ -5,7 +5,7 @@ jupyter:
       extension: .md
       format_name: markdown
       format_version: '1.3'
-      jupytext_version: 1.13.8
+      jupytext_version: 1.14.1
   kernelspec:
     display_name: Python 3.8.10 ('trading-GoF_m6Ee')
     language: python

diff --git a/research/inla_explore/log_quadrature.md b/research/inla_explore/log_quadrature.md
@@ -5,7 +5,7 @@ jupyter:
       extension: .md
       format_name: markdown
       format_version: '1.3'
-      jupytext_version: 1.13.8
+      jupytext_version: 1.14.1
   kernelspec:
     display_name: Python 3.10.2 ('imprint')
     language: python

diff --git a/research/inla_explore/mcmc_example.md b/research/inla_explore/mcmc_example.md
@@ -5,7 +5,7 @@ jupyter:
       extension: .md
       format_name: markdown
       format_version: '1.3'
-      jupytext_version: 1.13.8
+      jupytext_version: 1.14.1
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     display_name: 'Python 3.10.2 64-bit (''imprint'': conda)'
     language: python

diff --git a/research/inla_explore/pyinla.md b/research/inla_explore/pyinla.md
@@ -5,7 +5,7 @@ jupyter:
       extension: .md
       format_name: markdown
       format_version: '1.3'
-      jupytext_version: 1.13.8
+      jupytext_version: 1.14.1
   kernelspec:
     display_name: 'Python 3.10.2 64-bit (''imprint'': conda)'
     language: python

diff --git a/research/inla_explore/pyinla_hyper.md b/research/inla_explore/pyinla_hyper.md
@@ -5,7 +5,7 @@ jupyter:
       extension: .md
       format_name: markdown
       format_version: '1.3'
-      jupytext_version: 1.13.8
+      jupytext_version: 1.14.1
   kernelspec:
     display_name: 'Python 3.10.2 64-bit (''imprint'': conda)'
     language: python

diff --git a/research/inla_explore/sim.md b/research/inla_explore/sim.md
@@ -5,7 +5,7 @@ jupyter:
       extension: .md
       format_name: markdown
       format_version: '1.3'
-      jupytext_version: 1.13.8
+      jupytext_version: 1.14.1
   kernelspec:
     display_name: 'Python 3.10.2 64-bit (''imprint'': conda)'
     language: python

diff --git a/research/lei/analyze.md b/research/lei/analyze.md
@@ -5,7 +5,7 @@ jupyter:
       extension: .md
       format_name: markdown
       format_version: '1.3'
-      jupytext_version: 1.13.8
+      jupytext_version: 1.14.1
   kernelspec:
     display_name: Python 3.10.5 ('confirm')
     language: python

diff --git a/research/lei/analyze/analyze.md b/research/lei/analyze/analyze.md
@@ -5,7 +5,7 @@ jupyter:
       extension: .md
       format_name: markdown
       format_version: '1.3'
-      jupytext_version: 1.13.8
+      jupytext_version: 1.14.1
   kernelspec:
     display_name: Python 3.10.5 ('confirm')
     language: python

diff --git a/research/lei/lei.md b/research/lei/lei.md
@@ -5,7 +5,7 @@ jupyter:
       extension: .md
       format_name: markdown
       format_version: '1.3'
-      jupytext_version: 1.13.8
+      jupytext_version: 1.14.1
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     language: python

diff --git a/research/outlaw_vs_rinla/outlaw.md b/research/outlaw_vs_rinla/outlaw.md
@@ -5,7 +5,7 @@ jupyter:
       extension: .md
       format_name: markdown
       format_version: '1.3'
-      jupytext_version: 1.13.8
+      jupytext_version: 1.14.1
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     language: python

diff --git a/research/outlaw_vs_rinla/r_inla.md b/research/outlaw_vs_rinla/r_inla.md
@@ -5,7 +5,7 @@ jupyter:
       extension: .md
       format_name: markdown
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+      jupytext_version: 1.14.1
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     display_name: R
     language: R

diff --git a/research/outlaw_vs_rinla/r_inla_archive.md b/research/outlaw_vs_rinla/r_inla_archive.md
@@ -5,7 +5,7 @@ jupyter:
       extension: .md
       format_name: markdown
       format_version: '1.3'
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+      jupytext_version: 1.14.1
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diff --git a/research/outlaw_vs_rinla/r_inla_benchmark.md b/research/outlaw_vs_rinla/r_inla_benchmark.md
@@ -5,7 +5,7 @@ jupyter:
       extension: .md
       format_name: markdown
       format_version: '1.3'
-      jupytext_version: 1.13.8
+      jupytext_version: 1.14.1
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     language: R