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Added compatibility for .gz compressed fasta/fastq isoforms to SQANTI3_QC #326

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merged 3 commits into from
Sep 12, 2024

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Added support to also use gz compressed fastq files as isoforms input file when used as isoforms files in sqanti3_qc, and not just plain fasta.

This adds the feature requested in #312

@Fabian-RY Fabian-RY linked an issue Sep 11, 2024 that may be closed by this pull request
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@Fabian-RY Fabian-RY merged commit 57d30b1 into master Sep 12, 2024
@Fabian-RY Fabian-RY deleted the fastq_gz_support branch October 31, 2024 11:00
pabloati pushed a commit that referenced this pull request Dec 16, 2024
Added compatibility for .gz compressed fastq isoforms to SQANTI3_QC
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[FEATURE] support gzip'd input fastq files
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