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Merge pull request #138 from ComputationalPhysiology/pre-commit-ci-up… #564

Merge pull request #138 from ComputationalPhysiology/pre-commit-ci-up…

Merge pull request #138 from ComputationalPhysiology/pre-commit-ci-up… #564

Workflow file for this run

name: CI
on: [push]
jobs:
build:
name: Test on ${{ matrix.os }} with Python ${{ matrix.python-version }}
runs-on: ${{ matrix.os }}
strategy:
fail-fast: false
matrix:
os: [ubuntu-latest, macos-latest, windows-latest]
python-version: ["3.8", "3.9", "3.10", "3.11", "3.12"]
steps:
- uses: actions/checkout@v4
- name: Set up Python ${{ matrix.python-version }}
uses: actions/setup-python@v5
with:
python-version: ${{ matrix.python-version }}
- name: Install dependencies
run: |
python -m pip install -e ".[test]"
- name: Test with pytest with jit
run: |
python3 -m pytest
- name: Test with pytest without jit (to get correct coverage)
env:
NUMBA_DISABLE_JIT: 1
run: |
python3 -m pytest
- name: Extract Coverage
if: matrix.os == 'ubuntu-latest' && matrix.python-version == '3.11'
run: |
python3 -m coverage report | sed 's/^/ /' >> $GITHUB_STEP_SUMMARY
python3 -m coverage json
export TOTAL=$(python3 -c "import json;print(json.load(open('coverage.json'))['totals']['percent_covered_display'])")
echo "total=$TOTAL" >> $GITHUB_ENV
- name: Upload HTML report.
if: matrix.os == 'ubuntu-latest' && matrix.python-version == '3.11'
uses: actions/upload-artifact@v4
with:
name: html-report
path: htmlcov